RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 KLHDC4Q8TBB5 520 aa7.97□□□□□ -1.13
CKAP2-204ENST00000459902 CDK5RAP3Q96JB5 506 aa7.97□□□□□ -1.13
CKAP2-204ENST00000459902 PHACTR3Q96KR7 559 aa7.97□□□□□ -1.13
CKAP2-204ENST00000459902 FAM193BQ96PV7 902 aaPredicted RBP7.97□□□□□ -1.13
CKAP2-204ENST00000459902 C1orf112Q9NSG2 853 aa7.97□□□□□ -1.13
CKAP2-204ENST00000459902 OBP2AQ9NY56 170 aa7.97□□□□□ -1.13
CKAP2-204ENST00000459902 GRXCR1A8MXD5 290 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 B8ZZF3 427 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 B3GALT2O43825 422 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 TUSC2O75896 110 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 PRSS23O95084 383 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 ALAS1P13196 640 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 TYRP14679 529 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 HTR1BP28222 390 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 PRDX5P30044 214 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 IL12RB1P42701 662 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 USP39Q53GS9 565 aaKnown RBP7.96□□□□□ -1.14
CKAP2-204ENST00000459902 SH2D3CQ8N5H7 860 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 NLGN4YQ8NFZ3 816 aaPredicted RBP7.96□□□□□ -1.14
CKAP2-204ENST00000459902 IL17DQ8TAD2 202 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 PNPOQ9NVS9 261 aa7.96□□□□□ -1.14
CKAP2-204ENST00000459902 H3BUI4 141 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 SLC43A1O75387 559 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 ITGB1P05556 798 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 FTH1P19P0C7X4 201 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 PLS1Q14651 629 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 GRM3Q14832 879 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-204ENST00000459902 FAM90A1Q86YD7 464 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 C1orf210Q8IVY1 113 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 FAM167AQ96KS9 214 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 NEU1Q99519 415 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 ARMT1Q9H993 441 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 AURKAIP1Q9NWT8 199 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-204ENST00000459902 EIF2B4Q9UI10 523 aaKnown RBP7.95□□□□□ -1.14
CKAP2-204ENST00000459902 SORCS3Q9UPU3 1222 aa7.95□□□□□ -1.14
CKAP2-204ENST00000459902 CDHR4A6H8M9 788 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 A6NNZ2 444 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 HAUS5O94927 633 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 RNASE9P60153 205 aaKnown RBP7.94□□□□□ -1.14
CKAP2-204ENST00000459902 TOB2Q14106 344 aaPredicted RBP7.94□□□□□ -1.14
CKAP2-204ENST00000459902 GBX1Q14549 363 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 ZFPM1Q8IX07 1006 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 SLC35A4Q96G79 324 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 C1orf43Q9BWL3 253 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 WDCPQ9H6R7 721 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 SIDT1Q9NXL6 827 aaKnown RBP7.94□□□□□ -1.14
CKAP2-204ENST00000459902 PCDHA1Q9Y5I3 950 aa7.94□□□□□ -1.14
CKAP2-204ENST00000459902 A0A088AWK7 358 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 ZNF185O15231 689 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 LLGL1Q15334 1064 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 NRN1LQ496H8 165 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 CCDC93Q567U6 631 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 HSP90AB2PQ58FF8 381 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 RABL3Q5HYI8 236 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 NPNTQ6UXI9 565 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 DAAM2Q86T65 1068 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 PPP1R3BQ86XI6 285 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 FITM2Q8N6M3 262 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 TBC1D15Q8TC07 691 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 DCLRE1CQ96SD1 692 aaKnown RBP7.93□□□□□ -1.14
CKAP2-204ENST00000459902 PACSIN1Q9BY11 444 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 B3GNT5Q9BYG0 378 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 TMEM60Q9H2L4 133 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 MRPL46Q9H2W6 279 aaKnown RBP7.93□□□□□ -1.14
CKAP2-204ENST00000459902 ZNF703Q9H7S9 590 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-204ENST00000459902 JKAMPQ9P055 326 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 CEP72Q9P209 647 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 FEZ2Q9UHY8 353 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-204ENST00000459902 SLC45A2Q9UMX9 530 aa7.93□□□□□ -1.14
CKAP2-204ENST00000459902 PRSS29PA6NIE9 313 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 AHRRA9YTQ3 701 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 PRRG2O14669 202 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 TRIM24O15164 1050 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 FAM20BO75063 409 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 SCAF4O95104 1147 aaKnown RBP7.92□□□□□ -1.14
CKAP2-204ENST00000459902 AGFG1P52594 562 aaKnown RBP7.92□□□□□ -1.14
CKAP2-204ENST00000459902 UTP14CQ5TAP6 766 aaKnown RBP7.92□□□□□ -1.14
CKAP2-204ENST00000459902 AGAP9Q5VTM2 703 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 TSHZ3Q63HK5 1081 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 RHOT2Q8IXI1 618 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 CPT1CQ8TCG5 803 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 TEX101Q9BY14 249 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 PRDM11Q9NQV5 511 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 GNL3LQ9NVN8 582 aaKnown RBP7.92□□□□□ -1.14
CKAP2-204ENST00000459902 CHST2Q9Y4C5 530 aa7.92□□□□□ -1.14
CKAP2-204ENST00000459902 USP15Q9Y4E8 981 aaPredicted RBP7.92□□□□□ -1.14
CKAP2-204ENST00000459902 FRMPD2Q68DX3 1309 aaPredicted RBP7.92□□□□□ -1.14
CKAP2-204ENST00000459902 DIRC3C9JPN6 131 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 C1QTNF3-AMACRE9PGA6 284 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 RECQL4O94761 1208 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 AGFG2O95081 481 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 CKBP12277 381 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 GCSHP23434 173 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 PIK3CGP48736 1102 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 RAB1AP62820 205 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 NOMO3P69849 1222 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 ANO6Q4KMQ2 910 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 NOMO2Q5JPE7 1267 aa7.91□□□□□ -1.14
CKAP2-204ENST00000459902 RNF207Q6ZRF8 634 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms