RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 C3orf58Q8NDZ4 430 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 PABPC5Q96DU9 382 aaKnown RBP15.59■□□□□ 0.09
COL3A1-203ENST00000450867 KIF12Q96FN5 646 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 GBP4Q96PP9 640 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 PCIF1Q9H4Z3 704 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 LMBRD1Q9NUN5 540 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 DMAC2Q9NW81 257 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 TUBGCP4Q9UGJ1 667 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 PODXLO00592 558 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 TADA2AO75478 443 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 C1RP00736 705 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 NFICP08651 508 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 PAX3P23760 479 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 GLUD2P49448 558 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 WNT7BP56706 349 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 ADAM15Q13444 863 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 TMEM132DQ14C87 1099 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 USP41Q3LFD5 358 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 ZNF658Q5TYW1 1059 aaPredicted RBP15.58■□□□□ 0.08
COL3A1-203ENST00000450867 TAS1R1Q7RTX1 841 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 EFCAB13Q8IY85 973 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 XXYLT1Q8NBI6 393 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 RABGGTAQ92696 567 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 SMARCE1Q969G3 411 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 RXFP1Q9HBX9 757 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 RBAKQ9NYW8 714 aaPredicted RBP15.58■□□□□ 0.08
COL3A1-203ENST00000450867 SSX2IPQ9Y2D8 614 aa15.58■□□□□ 0.08
COL3A1-203ENST00000450867 ANO9A1A5B4 782 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 GOLGA8IPA6NC78 632 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 ZNF233A6NK53 670 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 GOLGA8JA6NMD2 632 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 B3GAT3O94766 335 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 CXCL14O95715 111 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 URODP06132 367 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 FGFR3P22607 806 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 IGFBP6P24592 240 aaPredicted RBP15.57■□□□□ 0.08
COL3A1-203ENST00000450867 NRIP1P48552 1158 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 AARSP49588 968 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL3A1-203ENST00000450867 SPAG1Q07617 926 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 SURF1Q15526 300 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 SNRNP35Q16560 246 aaKnown RBP15.57■□□□□ 0.08
COL3A1-203ENST00000450867 TMEM184AQ6ZMB5 413 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
COL3A1-203ENST00000450867 CBWD2Q8IUF1 395 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 BEST2Q8NFU1 509 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 MICAL1Q8TDZ2 1067 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 PPM1EQ8WY54 764 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 PIK3R5Q8WYR1 880 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 HLA-CQ95604 372 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 TLE6Q9H808 572 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 UBE2ZQ9H832 354 aaPredicted RBP15.57■□□□□ 0.08
COL3A1-203ENST00000450867 MRPL17Q9NRX2 175 aaKnown RBP15.57■□□□□ 0.08
COL3A1-203ENST00000450867 FNIP2Q9P278 1114 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 THEGQ9P2T0 379 aa15.57■□□□□ 0.08
COL3A1-203ENST00000450867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.56■□□□□ 0.08
COL3A1-203ENST00000450867 PIRO00625 290 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 CLIC2O15247 247 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 TRAPPC3O43617 180 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 GLP2RO95838 553 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 GTF2F1P35269 517 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL3A1-203ENST00000450867 LTBRP36941 435 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 MCCD1P59942 119 aaPredicted RBP15.56■□□□□ 0.08
COL3A1-203ENST00000450867 CREMQ03060 361 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 CXorf38Q8TB03 319 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 AUTS2Q8WXX7 1259 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 SUSD3Q96L08 255 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 MFSD14AQ96MC6 490 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 TTPALQ9BTX7 342 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 PRDM6Q9NQX0 595 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL3A1-203ENST00000450867 TTC28Q96AY4 2481 aa15.56■□□□□ 0.08
COL3A1-203ENST00000450867 M0QZQ0 153 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 MAPK13O15264 365 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 CALUO43852 315 aaPredicted RBP15.55■□□□□ 0.08
COL3A1-203ENST00000450867 CLASP2O75122 1294 aaKnown RBP15.55■□□□□ 0.08
COL3A1-203ENST00000450867 NR3C1P04150 777 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 CYP2J2P51589 502 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 CYP24A1Q07973 514 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 PSMD6Q15008 389 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 EDRF1Q3B7T1 1238 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 RTP2Q5QGT7 225 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 FAM171A1Q5VUB5 890 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 C9orf57Q5W0N0 161 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 CENPPQ6IPU0 288 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 PDXDC1Q6P996 788 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 VN1R2Q8NFZ6 395 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 HASPINQ8TF76 798 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 ATXN2LQ8WWM7 1075 aaKnown RBP15.55■□□□□ 0.08
COL3A1-203ENST00000450867 ERCC4Q92889 916 aaPredicted RBP15.55■□□□□ 0.08
COL3A1-203ENST00000450867 FAM212AQ96EL1 285 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 KLHL5Q96PQ7 755 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 GZF1Q9H116 711 aaPredicted RBP15.55■□□□□ 0.08
COL3A1-203ENST00000450867 PDE11AQ9HCR9 933 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 MAN1B1Q9UKM7 699 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 BDP1A6H8Y1 2624 aa15.55■□□□□ 0.08
COL3A1-203ENST00000450867 A0A0C4DFX4 3053 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 SYN3O14994 580 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 TBX10O75333 385 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 CSPG5O95196 566 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms