RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 THP07101 528 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 KRT13P13646 458 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 BMP6P22004 513 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 NR2F2P24468 414 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 ERCC5P28715 1186 aaPredicted RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 PSMC2P35998 433 aaKnown RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 STX17P56962 302 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 TYRO3Q06418 890 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 HYAL1Q12794 435 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 NFIL3Q16649 462 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 USP37Q86T82 979 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 DDX53Q86TM3 631 aaKnown RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 ZNF280BQ86YH2 543 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 EFHBQ8N7U6 833 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 CACTINQ8WUQ7 758 aaKnown RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 TMEM174Q8WUU8 243 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 TMEM169Q96HH4 297 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 IGSF21Q96ID5 467 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 TSPAN18Q96SJ8 248 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 GAD1Q99259 594 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 CDCA3Q99618 268 aaPredicted RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 ANP32EQ9BTT0 268 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 HAPLN2Q9GZV7 340 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 IGFLR1Q9H665 355 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 DMAC2Q9NW81 257 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 MIOSQ9NXC5 875 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 RBAKQ9NYW8 714 aaPredicted RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 STK39Q9UEW8 545 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 CPSF3Q9UKF6 684 aaKnown RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 FAN1Q9Y2M0 1017 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 R3HCC1Q9Y3T6 440 aaKnown RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 ZMYM2Q9UBW7 1377 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 SYCE3A1L190 88 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 LACTBL1A8MY62 500 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 NT5C1B-RDH14C9J2C7 533 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 ZC3H11AO75152 810 aaKnown RBP eCLIP9.95□□□□□ -0.82
RFX3-207ENST00000449190 GNA14O95837 355 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 POMCP01189 267 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 EPB41P11171 864 aaKnown RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 KCNA5P22460 613 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 PBX3P40426 434 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 MLH1P40692 756 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 SLC11A1P49279 550 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 AFF1P51825 1210 aaKnown RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 ENOX2Q16206 610 aaKnown RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 SNRNP35Q16560 246 aaKnown RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 DPCR1Q3MIW9 517 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 ZSCAN23Q3MJ62 389 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 FOXR2Q6PJQ5 311 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 TMC7Q7Z402 723 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 FILIP1Q7Z7B0 1213 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 COLGALT2Q8IYK4 626 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 CSGALNACT2Q8N6G5 542 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 CEP120Q8N960 986 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 MRPL43Q8N983 215 aaKnown RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 CEP63Q96MT8 703 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 FNBP1Q96RU3 617 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 ASB7Q9H672 318 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 TLE6Q9H808 572 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 SLC38A7Q9NVC3 462 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 CLDND1Q9NY35 253 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 MAGEC2Q9UBF1 373 aaPredicted RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 RALGAPA2Q2PPJ7 1873 aa9.95□□□□□ -0.82
RFX3-207ENST00000449190 FNDC1Q4ZHG4 1894 aaPredicted RBP9.95□□□□□ -0.82
RFX3-207ENST00000449190 SMTNL1A8MU46 457 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 NRP1O14786 923 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 MAPK13O15264 365 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 CXCL14O95715 111 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 CXCL8P10145 99 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 KCNE1P15382 129 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 GTF2F1P35269 517 aaKnown RBP eCLIP9.94□□□□□ -0.82
RFX3-207ENST00000449190 LTBRP36941 435 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 TNFSF9P41273 254 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 NRIP1P48552 1158 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 SCNN1GP51170 649 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 KCNQ1P51787 676 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 DSC1Q08554 894 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 GRIK3Q13003 919 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 DUSP6Q16828 381 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 SLC10A6Q3KNW5 377 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 CCDC40Q4G0X9 1142 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 ZCWPW2Q504Y3 356 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 ZBTB41Q5SVQ8 909 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 CRELD2Q6UXH1 353 aaPredicted RBP9.94□□□□□ -0.82
RFX3-207ENST00000449190 EP400NLQ6ZTU2 488 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 INTS8Q75QN2 995 aaKnown RBP9.94□□□□□ -0.82
RFX3-207ENST00000449190 ADGRD2Q7Z7M1 963 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 RBM23Q86U06 439 aaKnown RBP9.94□□□□□ -0.82
RFX3-207ENST00000449190 NT5DC4Q86YG4 428 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 CREBRFQ8IUR6 639 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 FAM114A1Q8IWE2 563 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 BRSK2Q8IWQ3 736 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 FAM186BQ8IYM0 893 aa9.94□□□□□ -0.82
RFX3-207ENST00000449190 GSTCDQ8NEC7 633 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms