RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 EPC1Q9H2F5 836 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 DEF6Q9H4E7 631 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 RUVBL1Q9Y265 456 aaKnown RBP5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 PRR5-ARHGAP8B1AHC4 643 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 PLSCR1O15162 318 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 CYP27B1O15528 508 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 IFIT2P09913 472 aaKnown RBP5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 NBPF7P0C2Y1 421 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 HK1P19367 917 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 ACRV1P26436 265 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 IL12RB1P42701 662 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 MORC3Q14149 939 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 GBX1Q14549 363 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 SPATS1Q496A3 300 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZBTB34Q8NCN2 500 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 RNF169Q8NCN4 708 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 IL17RDQ8NFM7 739 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 OR10H5Q8NGA6 315 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 PNISRQ8TF01 805 aaKnown RBP5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 TIFAQ96CG3 184 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 FAM193BQ96PV7 902 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 CGRRF1Q99675 332 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 VRK1Q99986 396 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 MAF1Q9H063 256 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 GNL3LQ9NVN8 582 aaKnown RBP5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 FBXO34Q9NWN3 711 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 DDX20Q9UHI6 824 aaKnown RBP5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 POLHQ9Y253 713 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 TSC22D4Q9Y3Q8 395 aa5.56□□□□□ -1.52
HMGB1P48-201ENST00000446155 XDHP47989 1333 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 A6NNZ2 444 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 BTBD11A6QL63 1104 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 F2RL2O00254 374 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 MUSKO15146 869 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 GRM6O15303 877 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 B3GALT2O43825 422 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 TUSC2O75896 110 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 UBXN7O94888 489 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 ARIH2O95376 493 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 FTLP02792 175 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 AMHP03971 560 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 CD1AP06126 327 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 SBK3P0C264 359 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 HIBADHP31937 336 aaKnown RBP5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 MAN2A2P49641 1150 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 KRTAP10-2P60368 255 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 NKX6-1P78426 367 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 PICALMQ13492 652 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 GALEQ14376 348 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 RRP1BQ14684 758 aaKnown RBP5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 PRKD1Q15139 912 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 FLYWCH1Q4VC44 716 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 PABPC1LQ4VXU2 614 aaKnown RBP5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 ATXN7L2Q5T6C5 722 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZNF529Q6P280 563 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 GADL1Q6ZQY3 521 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 HEATR3Q7Z4Q2 680 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 FAM90A1Q86YD7 464 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 CHST13Q8NET6 341 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 PLBD2Q8NHP8 589 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 NEU1Q99519 415 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 SARGQ9BW04 601 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 GPR87Q9BY21 358 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 KMT5AQ9NQR1 393 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 C1orf112Q9NSG2 853 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 USP25Q9UHP3 1055 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 TAGLN3Q9UI15 199 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 HDAC5Q9UQL6 1122 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 STXBP5LQ9Y2K9 1186 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 PCDHA3Q9Y5H8 950 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 NR2E3Q9Y5X4 410 aa5.55□□□□□ -1.52
HMGB1P48-201ENST00000446155 GOLGA6L6A8MZA4 724 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 C1QTNF3-AMACRE9PGA6 284 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 LEFTY2O00292 366 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 FTH1P19P0C7X4 201 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 TYRP14679 529 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 NEK3P51956 506 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 AGFG1P52594 562 aaKnown RBP5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 PTTG1IPP53801 180 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 RAP2BP61225 183 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 GRM3Q14832 879 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 IL31Q6EBC2 164 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 EFCAB12Q6NXP0 572 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 TMPRSS6Q8IU80 811 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZFPM1Q8IX07 1006 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 GSPT2Q8IYD1 628 aaKnown RBP5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 SPICE1Q8N0Z3 855 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 PJA1Q8NG27 643 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 CDK5RAP3Q96JB5 506 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 FAM167AQ96KS9 214 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 TMEM60Q9H2L4 133 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 LMBRD1Q9NUN5 540 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 SIDT1Q9NXL6 827 aaKnown RBP5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 CHST2Q9Y4C5 530 aa5.54□□□□□ -1.52
HMGB1P48-201ENST00000446155 TCRBV7S2A1N4TA0A589 114 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 DRGXA6NNA5 263 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 CTNND1O60716 968 aaKnown RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 SLC43A1O75387 559 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 WDHD1O75717 1129 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms