RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CILPO75339 1184 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 PRKCSHP14314 528 aaPredicted RBP7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 MCM2P49736 904 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 ELAVL2Q12926 359 aaKnown RBP7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 IGFBP7Q16270 282 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 STOX1Q6ZVD7 989 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 C12orf40Q86WS4 652 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 HEATR4Q86WZ0 1026 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 SEPT1Q8WYJ6 367 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 TSR2Q969E8 191 aaKnown RBP7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 VCPIP1Q96JH7 1222 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 E2F8A0AVK6 867 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 PALM3A6NDB9 673 aaPredicted RBP7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 CCT8P50990 548 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 NFKB2Q00653 900 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 CDCP2Q5VXM1 449 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 MTHFD1LQ6UB35 978 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 USP53Q70EK8 1073 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 TAOK1Q7L7X3 1001 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 ZSCAN1Q8NBB4 408 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 INPP4AQ96PE3 977 aaPredicted RBP7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 FUCA2Q9BTY2 467 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 NRP1O14786 923 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 BCAR3O75815 825 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 SLC3A2P08195 630 aaKnown RBP7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 PTGER3P43115 390 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 ZNF33AQ06730 810 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 RSRC2Q7L4I2 434 aaKnown RBP7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 LCORLQ8N3X6 602 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 SDR42E1Q8WUS8 393 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 MDFIQ99750 246 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 CLCA2Q9UQC9 943 aa7.29□□□□□ -1.24
BRAFP1-201ENST00000445336 PRKCGP05129 697 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 PHKA2P46019 1235 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 TRAPPC10P48553 1259 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 KCNAB2Q13303 367 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 EOGTQ5NDL2 527 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 CADM4Q8NFZ8 388 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 FAM193BQ96PV7 902 aaPredicted RBP7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 KIF9Q9HAQ2 790 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 PRDM16Q9HAZ2 1276 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 PA2G4Q9UQ80 394 aaKnown RBP7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 BACE2Q9Y5Z0 518 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 ARID2Q68CP9 1835 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 A0A0G2JK05 382 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 CCL16O15467 120 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 VPS4BO75351 444 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 CD99P14209 185 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 DSC1Q08554 894 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 SKIDA1Q1XH10 827 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 IGSF8Q969P0 613 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 DEPDC7Q96QD5 511 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 B3GNT4Q9C0J1 378 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 VPS4AQ9UN37 437 aa7.28□□□□□ -1.24
BRAFP1-201ENST00000445336 DOCK6Q96HP0 2047 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 OTOGQ6ZRI0 2925 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 LRRK2Q5S007 2527 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 CACNA1EQ15878 2313 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 SLC38A8A6NNN8 435 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 IPO5O00410 1097 aaKnown RBP7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 JAK2O60674 1132 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 F12P00748 615 aaPredicted RBP7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 LDLRP01130 860 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 SP2Q02086 613 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 KLRB1Q12918 225 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 PDGFRLQ15198 375 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 UBE3CQ15386 1083 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 CYP4A22Q5TCH4 519 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 EPB41L4AQ9HCS5 686 aaPredicted RBP7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 PCDHA1Q9Y5I3 950 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 F5P12259 2224 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 CDRT15L2A8MXV6 281 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 APAF1O14727 1248 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 GPR32O75388 356 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 ST3GAL1Q11201 340 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 CLN3Q13286 438 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 PROX2Q3B8N5 592 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 GPATCH4Q5T3I0 446 aaKnown RBP7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 SV2AQ7L0J3 742 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 COLGALT2Q8IYK4 626 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 SGPP1Q9BX95 441 aa7.27□□□□□ -1.25
BRAFP1-201ENST00000445336 SVILO95425 2214 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 ZNF532Q9HCE3 1301 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 IFIT2P09913 472 aaKnown RBP7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 INSRRP14616 1297 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 ADCY7P51828 1080 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 MYO1EQ12965 1108 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 SLC5A9Q2M3M2 681 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 ZSCAN25Q6NSZ9 544 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 RPLP0P6Q8NHW5 317 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 TMEM87BQ96K49 555 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 CATSPER2Q96P56 530 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 GAREM1Q9H706 876 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 ZNF106Q9H2Y7 1883 aaKnown RBP7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 LDOC1O95751 146 aaPredicted RBP7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 EGFP01133 1207 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 GNAI3P08754 354 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms