RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	SRGAP1	Q7Z6B7	1085 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	TICAM2	Q86XR7	235 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	SYNPO	Q8N3V7	929 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	PNPLA1	Q8N8W4	532 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	PIGK	Q92643	395 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	TMEM143	Q96AN5	459 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	LENG9	Q96B70	501 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	DDX27	Q96GQ7	796 aa	Known RBP	10.17	□□□□□ -0.78
RPE-213	ENST00000445268	LRRC3B	Q96PB8	259 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	TPSD1	Q9BZJ3	242 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	CXCL16	Q9H2A7	254 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	GIT1	Q9Y2X7	761 aa		10.17	□□□□□ -0.78
RPE-213	ENST00000445268	PIEZO2	Q9H5I5	2752 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	ZNF638	Q14966	1978 aa	Known RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	HELZ	P42694	1942 aa	Known RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268		E7EWF7	191 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268		I3L4J1	428 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	ZNF197	O14709	1029 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	SEC24A	O95486	1093 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	NPTXR	O95502	500 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	CYP3A4	P08684	503 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	ENG	P17813	658 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	TKT	P29401	623 aa	Known RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	DHPS	P49366	369 aa	Predicted RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	FCHO2	Q0JRZ9	810 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	TUSC3	Q13454	348 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	ZNF423	Q2M1K9	1284 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	XKR3	Q5GH77	459 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	NOTUM	Q6P988	496 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	ARMCX6	Q7L4S7	300 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	ZNF579	Q8NAF0	562 aa	Known RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	SHKBP1	Q8TBC3	707 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	NIFK	Q9BYG3	293 aa	Known RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	CSRNP2	Q9H175	543 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	TRPV4	Q9HBA0	871 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	PARP2	Q9UGN5	583 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	MBD1	Q9UIS9	605 aa	Predicted RBP	10.16	□□□□□ -0.78
RPE-213	ENST00000445268	INSL5	Q9Y5Q6	135 aa		10.16	□□□□□ -0.78
RPE-213	ENST00000445268	SMCO2	A6NFE2	343 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	DDX11L8	A8MPP1	907 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	ATXN7	O15265	892 aa	Predicted RBP	10.15	□□□□□ -0.78
RPE-213	ENST00000445268	EGF	P01133	1207 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	FGFR3	P22607	806 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	DGKE	P52429	567 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	SPIRE1	Q08AE8	756 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	LAMTOR4	Q0VGL1	99 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	CYP4A22	Q5TCH4	519 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	NAIF1	Q69YI7	327 aa	Predicted RBP	10.15	□□□□□ -0.78
RPE-213	ENST00000445268	PPP1R18	Q6NYC8	613 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	PDXDC1	Q6P996	788 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	NFXL1	Q6ZNB6	911 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	MARCH9	Q86YJ5	346 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	RNF149	Q8NC42	400 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	OR2I1P	Q8NGU4	316 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	NCOA7	Q8NI08	942 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	PIP4K2C	Q8TBX8	421 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	PRPF31	Q8WWY3	499 aa	Known RBP	10.15	□□□□□ -0.78
RPE-213	ENST00000445268	CHFR	Q96EP1	664 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	CAMK1G	Q96NX5	476 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	TMEM209	Q96SK2	561 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	TRIM6	Q9C030	488 aa	Predicted RBP	10.15	□□□□□ -0.78
RPE-213	ENST00000445268	CYP4F11	Q9HBI6	524 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	IGSF5	Q9NSI5	407 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	CEP72	Q9P209	647 aa		10.15	□□□□□ -0.78
RPE-213	ENST00000445268	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.15	□□□□□ -0.78
RPE-213	ENST00000445268	EVL	Q9UI08	416 aa	Predicted RBP	10.15	□□□□□ -0.78
RPE-213	ENST00000445268	PLXND1	Q9Y4D7	1925 aa		10.15	□□□□□ -0.79
RPE-213	ENST00000445268	PTGES	O14684	152 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	MSH4	O15457	936 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	B4GALT5	O43286	388 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	GAS7	O60861	476 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	MICAL2	O94851	1124 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	APBB3	O95704	486 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	U2AF2	P26368	475 aa	Known RBP eCLIP	10.14	□□□□□ -0.79	6e-8	■■■□□ 14.9
RPE-213	ENST00000445268	ELF1	P32519	619 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	RDX	P35241	583 aa	Known RBP	10.14	□□□□□ -0.79
RPE-213	ENST00000445268	JAK3	P52333	1124 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	NPEPPS	P55786	919 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	ARPP19	P56211	112 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	CACNB1	Q02641	598 aa	Predicted RBP	10.14	□□□□□ -0.79
RPE-213	ENST00000445268	LMAN2	Q12907	356 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	TMEM196	Q5HYL7	178 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	ANO5	Q75V66	913 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	RTL10	Q7L3V2	364 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	MIER3	Q7Z3K6	550 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	MICU3	Q86XE3	530 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	CAMKK1	Q8N5S9	505 aa		10.14	□□□□□ -0.79
RPE-213	ENST00000445268	PSPC1	Q8WXF1	523 aa	Known RBP	10.14	□□□□□ -0.79
RPE-213	ENST00000445268	NUSAP1	Q9BXS6	441 aa	Known RBP	10.14	□□□□□ -0.79
RPE-213	ENST00000445268	COL5A1	P20908	1838 aa	Predicted RBP	10.14	□□□□□ -0.79
RPE-213	ENST00000445268	DOPEY2	Q9Y3R5	2298 aa		10.13	□□□□□ -0.79
RPE-213	ENST00000445268	TEP1	Q99973	2627 aa	Known RBP	10.13	□□□□□ -0.79
RPE-213	ENST00000445268	TSC2	P49815	1807 aa		10.13	□□□□□ -0.79
RPE-213	ENST00000445268		A0A1W2PRU2	124 aa		10.13	□□□□□ -0.79
RPE-213	ENST00000445268	CCDC69	A6NI79	296 aa		10.13	□□□□□ -0.79
RPE-213	ENST00000445268	INO80B-WBP1	J3KQ70	363 aa		10.13	□□□□□ -0.79
RPE-213	ENST00000445268	TK2	O00142	265 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms