RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ACBD3Q9H3P7 528 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 TTC7AQ9ULT0 858 aaPredicted RBP16.8■□□□□ 0.28
SNX13-204ENST00000444712 MGAMO43451 1857 aa16.8■□□□□ 0.28
SNX13-204ENST00000444712 CEP104O60308 925 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 GJB1P08034 283 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 ACO1P21399 889 aaKnown RBP16.79■□□□□ 0.28
SNX13-204ENST00000444712 THNSL1Q8IYQ7 743 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 UBL4BQ8N7F7 174 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 APOBEC3GQ9HC16 384 aaKnown RBP16.79■□□□□ 0.28
SNX13-204ENST00000444712 A0A087WZ62 844 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 TNFRSF8P28908 595 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 SPOPLQ6IQ16 392 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 RGMBQ6NW40 437 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 FDXACB1Q9BRP7 624 aaPredicted RBP16.79■□□□□ 0.28
SNX13-204ENST00000444712 LRRC1Q9BTT6 524 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 MTMR12Q9C0I1 747 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 NIF3L1Q9GZT8 377 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 GOLPH3Q9H4A6 298 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 AVENQ9NQS1 362 aaPredicted RBP16.79■□□□□ 0.28
SNX13-204ENST00000444712 EHD2Q9NZN4 543 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 STIM2Q9P246 746 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 L1RE1Q9UN81 338 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 COG5Q9UP83 839 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 NUB1Q9Y5A7 615 aa16.79■□□□□ 0.28
SNX13-204ENST00000444712 A6NJR5 290 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 IGF2BP3O00425 579 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNX13-204ENST00000444712 GNA15P30679 374 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 PPP2R5EQ16537 467 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 RBBP8NLQ8NC74 664 aaPredicted RBP16.78■□□□□ 0.28
SNX13-204ENST00000444712 ZNF564Q8TBZ8 553 aaPredicted RBP16.78■□□□□ 0.28
SNX13-204ENST00000444712 NLRP7Q8WX94 980 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 SCLT1Q96NL6 688 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 ADPGKQ9BRR6 497 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 MINDY3Q9H8M7 445 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 NMRK2Q9NPI5 230 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 TMEM59LQ9UK28 342 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
SNX13-204ENST00000444712 MAP2K7O14733 419 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 B4GALT5O43286 388 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 ERLIN2O94905 339 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 UNGP13051 313 aaPredicted RBP16.77■□□□□ 0.28
SNX13-204ENST00000444712 RGS2P41220 211 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 NSFP46459 744 aaKnown RBP16.77■□□□□ 0.28
SNX13-204ENST00000444712 TFAMQ00059 246 aaKnown RBP16.77■□□□□ 0.28
SNX13-204ENST00000444712 CENPCQ03188 943 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 PCBP1Q15365 356 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNX13-204ENST00000444712 EEF1DP3Q658K8 133 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 OLFML2BQ68BL8 750 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 TMEM270Q6UE05 265 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 VCPIP1Q96JH7 1222 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 NUP85Q9BW27 656 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 ASB7Q9H672 318 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 ACP6Q9NPH0 428 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 SMARCAL1Q9NZC9 954 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 Q9Y3F1 56 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 NOC2LQ9Y3T9 749 aaKnown RBP16.77■□□□□ 0.28
SNX13-204ENST00000444712 NRCAMQ92823 1304 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 CITO14578 2027 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 DOCK3Q8IZD9 2030 aa16.77■□□□□ 0.28
SNX13-204ENST00000444712 CYP1A1P04798 512 aaPredicted RBP16.77■□□□□ 0.27
SNX13-204ENST00000444712 AMHR2Q16671 573 aa16.77■□□□□ 0.27
SNX13-204ENST00000444712 CCNI2Q6ZMN8 369 aaPredicted RBP16.77■□□□□ 0.27
SNX13-204ENST00000444712 FAM84AQ96KN4 292 aa16.77■□□□□ 0.27
SNX13-204ENST00000444712 ZFYVE28Q9HCC9 887 aa16.77■□□□□ 0.27
SNX13-204ENST00000444712 CNOT8Q9UFF9 292 aaKnown RBP16.77■□□□□ 0.27
SNX13-204ENST00000444712 GNEQ9Y223 722 aaKnown RBP16.77■□□□□ 0.27
SNX13-204ENST00000444712 ALG6Q9Y672 507 aa16.77■□□□□ 0.27
SNX13-204ENST00000444712 A0A0U1RQG5 324 aaPredicted RBP16.76■□□□□ 0.27
SNX13-204ENST00000444712 DDX3YO15523 660 aaKnown RBP16.76■□□□□ 0.27
SNX13-204ENST00000444712 F2P00734 622 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 VTNP04004 478 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 CBX1P83916 185 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 SREBF2Q12772 1141 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 ZNF699Q32M78 642 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 C17orf99Q6UX52 265 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 IFT20Q8IY31 132 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 UBR7Q8N806 425 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 ZNF668Q96K58 619 aaPredicted RBP16.76■□□□□ 0.27
SNX13-204ENST00000444712 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 VIPAS39Q9H9C1 493 aa16.76■□□□□ 0.27
SNX13-204ENST00000444712 DYNC1LI2O43237 492 aaPredicted RBP16.75■□□□□ 0.27
SNX13-204ENST00000444712 SLC10A3P09131 477 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 HSPA6P17066 643 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 CPT1AP50416 773 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 ZNF132P52740 706 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 MYL6P60660 151 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 MARCH8Q5T0T0 291 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 TLK2Q86UE8 772 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 CD302Q8IX05 232 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 MCOLN2Q8IZK6 566 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms