RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CAPZA3Q96KX2 299 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 ISCUQ9H1K1 167 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 PDZD7Q9H5P4 517 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 PTPRHQ9HD43 1115 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS50-205ENST00000441602 ITGA11Q9UKX5 1188 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 NENFQ9UMX5 172 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 C2CD2Q9Y426 696 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 V9GYY5 206 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 MCM3APO60318 1980 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 A0A0U1RQG5 324 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 MBLAC1A4D2B0 266 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 HAS3O00219 553 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 THAP12O43422 761 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 TSPAN1O60635 241 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 KIF4AO95239 1232 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 HADHBP55084 474 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 GJA9P57773 515 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 LACTBP83111 547 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 SP3Q02447 781 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 CLEC16AQ2KHT3 1053 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 C11orf63Q6NUN7 778 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 RSRC2Q7L4I2 434 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 PCSK9Q8NBP7 692 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 ZNF516Q92618 1163 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 PI4K2AQ9BTU6 479 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 MTMR12Q9C0I1 747 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 GPR88Q9GZN0 384 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 MIS12Q9H081 205 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 AVENQ9NQS1 362 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS50-205ENST00000441602 TFR2Q9UP52 801 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 GINS2Q9Y248 185 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 SCINQ9Y6U3 715 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 DUSP10Q9Y6W6 482 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 SIP14410 1827 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 GOLGA6L10A0A0M3HER8 536 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 B4GALT5O43286 388 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 CABYRO75952 493 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 LSM8O95777 96 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 FTCDO95954 541 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 GNRH1P01148 92 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 DARSP14868 501 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 HSPA6P17066 643 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 ARF4P18085 180 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 GNA15P30679 374 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 POLR2BP30876 1174 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 CRYBB1P53674 252 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 SNX16P57768 344 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 OSTNP61366 133 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 RBM10P98175 930 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 CCL14Q16627 93 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 GNASQ5JWF2 1037 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 TMEM63BQ5T3F8 832 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 MEI1Q5TIA1 1274 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 TMEM270Q6UE05 265 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 NOP9Q86U38 636 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 TMEM35BQ8NCS4 154 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 OR5B17Q8NGF7 314 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 SLC20A1Q8WUM9 679 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 KAT5Q92993 513 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 CAPNS2Q96L46 248 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 PPP1R16BQ96T49 567 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 SYT11Q9BT88 431 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 PACSIN1Q9BY11 444 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 IFT122Q9HBG6 1241 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 MRPL47Q9HD33 250 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 NOCTQ9UK39 431 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 SEPT4O43236 478 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 VNN1O95497 513 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 NPTXRO95502 500 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CALB1P05937 261 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CXCL8P10145 99 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 DESP17661 470 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 TNFSF9P41273 254 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 GPS2Q13227 327 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 STILQ15468 1287 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 KIZQ2M2Z5 673 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 GLE1Q53GS7 698 aaKnown RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 FAM47CQ5HY64 1035 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 ZBTB41Q5SVQ8 909 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 VCPIP1Q96JH7 1222 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 ZNF518BQ9C0D4 1074 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 HAPLN2Q9GZV7 340 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 UPF3AQ9H1J1 476 aaKnown RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 ARFGAP3Q9NP61 516 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 FLRT1Q9NZU1 646 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 A0A1B0GUA9 196 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 TARSL2A2RTX5 802 aaKnown RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 LACTBL1A8MY62 500 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 ABLIM1O14639 778 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 KCNK3O14649 394 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 ATP8B1O43520 1251 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 SPOPO43791 374 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CEP104O60308 925 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 ABL1P00519 1130 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CD4P01730 458 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 GJB1P08034 283 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CYBAP13498 195 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms