RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CBWD2Q8IUF1 395 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 GLYCTKQ8IVS8 523 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 FAM71AQ8IYT1 594 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 GJD3Q8N144 294 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 OLIG1Q8TAK6 271 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 EPS8L1Q8TE68 723 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 COG1Q8WTW3 980 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 SEPT1Q8WYJ6 367 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 FNBP1Q96RU3 617 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 AGPAT1Q99943 283 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 CARD9Q9H257 536 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 IKZF4Q9H2S9 585 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 SLC28A3Q9HAS3 691 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 MSRAQ9UJ68 235 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 AMFRQ9UKV5 643 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 TTC7AQ9ULT0 858 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-209ENST00000440653 L1RE1Q9UN81 338 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 COG5Q9UP83 839 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 MCM3APO60318 1980 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 ANK1P16157 1881 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 TRIOO75962 3097 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 DNAJC25-GNG10A0A024R161 153 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 GOLGA6L10A0A0M3HER8 536 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 LRRIQ4A6NIV6 560 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ASB14A6NK59 587 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 TISP43B9A030 160 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 KBTBD13C9JR72 458 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 NOP56O00567 594 aaKnown RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ZNF185O15231 689 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 NCK2O43639 380 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 RTN2O75298 545 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 MAFO75444 373 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 CNMDO75829 334 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 GGPS1O95749 300 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ACRP10323 421 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 MYOGP15173 224 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 TBXAS1P24557 533 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ARL2P36404 184 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 PLA2G4AP47712 749 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 AARSP49588 968 aaKnown RBP eCLIP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 GALCP54803 685 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 BPIFB4P59827 614 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 DLG4P78352 724 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 SP4Q02446 784 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 MXD4Q14582 209 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 SMC1AQ14683 1233 aaKnown RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 CASP8Q14790 479 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 SURF1Q15526 300 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 TARBP2Q15633 366 aaKnown RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ARHGAP44Q17R89 818 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 C1orf53Q5VUE5 145 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 SLC39A4Q6P5W5 647 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 TRIM72Q6ZMU5 477 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 C15orf39Q6ZRI6 1047 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 SEPT14Q6ZU15 432 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 HFE2Q6ZVN8 426 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 PLPPR4Q7Z2D5 763 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 GPR142Q7Z601 462 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 DAAM2Q86T65 1068 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ARHGEF19Q8IW93 802 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ZBTB8OSQ8IWT0 167 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 IFT20Q8IY31 132 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 PPM1KQ8N3J5 372 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 RASGEF1CQ8N431 466 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 RDH13Q8NBN7 331 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 FAM71BQ8TC56 605 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 HLA-CQ95604 372 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 SAAL1Q96ER3 474 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 HES6Q96HZ4 224 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 MMP19Q99542 508 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 CGRRF1Q99675 332 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 APBA2Q99767 749 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 PAGR1Q9BTK6 254 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 KIFC3Q9BVG8 833 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ISCUQ9H1K1 167 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 EPC1Q9H2F5 836 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 SLITRK6Q9H5Y7 841 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 ABCB6Q9NP58 842 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 UBE2TQ9NPD8 197 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 TMEM39AQ9NV64 488 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 RAB20Q9NX57 234 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 UVRAGQ9P2Y5 699 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 LCMT1Q9UIC8 334 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 NOCTQ9UK39 431 aaKnown RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 GTF3C4Q9UKN8 822 aa9.81□□□□□ -0.84
HDAC6-209ENST00000440653 AGO2Q9UKV8 859 aaKnown RBP9.81□□□□□ -0.84
HDAC6-209ENST00000440653 COL1A2P08123 1366 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 SOWAHBA6NEL2 793 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 ANKRD63C9JTQ0 380 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 KCNK3O14649 394 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 MSCO60682 206 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 PQBP1O60828 265 aaKnown RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 SASH3O75995 380 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 MYBL1P10243 752 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 GLRA2P23416 452 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 OAS2P29728 719 aaKnown RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 CYP2C19P33261 490 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 TCF7P36402 384 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-209ENST00000440653 PIK3CAP42336 1068 aa9.8□□□□□ -0.84
HDAC6-209ENST00000440653 TNNT3P45378 269 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms