RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 RBBP8NLQ8NC74 664 aaPredicted RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 CABS1Q96KC9 395 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 HAUS8Q9BT25 410 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 RAB23Q9ULC3 237 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 A0A087WZ62 844 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 EXOC1LA0A1B0GW35 172 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 TTC4O95801 387 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 MIB1Q86YT6 1006 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 CACNA2D3Q8IZS8 1091 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 FDXACB1Q9BRP7 624 aaPredicted RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 CEMIPQ8WUJ3 1361 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 ARP10275 920 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 PTPRAP18433 802 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 ALDH5A1P51649 535 aaPredicted RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 FRMD5Q7Z6J6 570 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 GMCL1Q96IK5 515 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 ZBTB18Q99592 522 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 MAP10Q9P2G4 905 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 NDUFA10O95299 355 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 INSRRP14616 1297 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 SP100P23497 879 aaPredicted RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 GFPT1Q06210 699 aaPredicted RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 ELAVL2Q12926 359 aaKnown RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 ZC3H18Q86VM9 953 aaKnown RBP12.78□□□□□ -0.36
NEK1-201ENST00000439128 OOSP2Q86WS3 158 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 ATP6V0D2Q8N8Y2 350 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 CIPCQ9C0C6 399 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 ITIH6Q6UXX5 1313 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 ZNF197O14709 1029 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 TAL1P17542 331 aaPredicted RBP12.77□□□□□ -0.36
NEK1-201ENST00000439128 FKBP1BP68106 108 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 B4GALNT4Q76KP1 1039 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 PTF1AQ7RTS3 328 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 TRIM42Q8IWZ5 723 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 CSDE1O75534 798 aaKnown RBP12.77□□□□□ -0.36
NEK1-201ENST00000439128 AP1G2O75843 785 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 HLA-DRAP01903 254 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 SMARCA1P28370 1054 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 RAB27AP51159 221 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 ARL4CP56559 192 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 PLD1Q13393 1074 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 PCNX4Q63HM2 1172 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.36
NEK1-201ENST00000439128 DDI1Q8WTU0 396 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.36
NEK1-201ENST00000439128 CATSPERBQ9H7T0 1116 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 SAYSD1Q9NPB0 183 aa12.77□□□□□ -0.36
NEK1-201ENST00000439128 TTC7AQ9ULT0 858 aaPredicted RBP12.77□□□□□ -0.36
NEK1-201ENST00000439128 SLC26A2P50443 739 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 NAA25Q14CX7 972 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 CXCL17Q6UXB2 119 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 ANKS3Q6ZW76 656 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 RNF135Q8IUD6 432 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 CFAP61Q8NHU2 1237 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 WNK4Q96J92 1243 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 ITSN1Q15811 1721 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 IL9RQ01113 521 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 OCRLQ01968 901 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 STARD3Q14849 445 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 PCSK7Q16549 785 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 LLGL2Q6P1M3 1020 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 BFARQ9NZS9 450 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 SENP1Q9P0U3 644 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 IQANK1A0A1B0GTG1 560 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 LGALS16A8MUM7 142 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 LZTS3O60299 673 aaPredicted RBP12.77□□□□□ -0.37
NEK1-201ENST00000439128 FGFR4P22455 802 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 SLCO1A2P46721 670 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
NEK1-201ENST00000439128 RCN2Q14257 317 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 PTPAQ15257 358 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 RBBP7Q16576 425 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 KIF19Q2TAC6 998 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
NEK1-201ENST00000439128 APOL5Q9BWW9 433 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 ATXN3LQ9H3M9 355 aa12.77□□□□□ -0.37
NEK1-201ENST00000439128 CNTNAP5Q8WYK1 1306 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 CASQ2O14958 399 aaPredicted RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 RALBP11234 206 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 FAM171A1Q5VUB5 890 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 IQSEC1Q6DN90 963 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 DSEQ9UL01 958 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 SLC30A1Q9Y6M5 507 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 SLC16A3O15427 465 aaKnown RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 ACO1P21399 889 aaKnown RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 KCNA1Q09470 495 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 TBCCQ15814 346 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 PPHLN1Q8NEY8 458 aaKnown RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms