RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 CDK12Q9NYV4 1490 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 NBPF26B4DH59 902 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 LMNAP02545 664 aaKnown RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 EMC2Q15006 297 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 EPHA7Q15375 998 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 NBPF10Q6P3W6 841 aaKnown RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 DEFB129Q9H1M3 183 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 MTMR4Q9NYA4 1195 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 CD274Q9NZQ7 290 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 EEF2KO00418 725 aaKnown RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 RBP5P82980 135 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 DEUP1Q05D60 604 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 MTF1Q14872 753 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 TJAP1Q5JTD0 557 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 GLB1LQ6UWU2 654 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 GPRC5AQ8NFJ5 357 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 TMA16Q96EY4 203 aaKnown RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 KDM4CQ9H3R0 1056 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 IL1RL2Q9HB29 575 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 SELENONQ9NZV5 590 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 ZFATQ9P243 1243 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 NCAM1P13591 858 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 WASHC5Q12768 1159 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 PWP1Q13610 501 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 STRIP1Q5VSL9 837 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 VMP1Q96GC9 406 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 WNT8AQ9H1J5 351 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 EYA4O95677 639 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 ATP1A1P05023 1023 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 USP11P51784 963 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 PLIN5Q00G26 463 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 E2F4Q16254 413 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 ATF7IP2Q5U623 682 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 SHC4Q6S5L8 630 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 DEFB132Q7Z7B7 95 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 ASAP3Q8TDY4 903 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 FOPNLQ96NB1 174 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 GPR63Q9BZJ6 419 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 MYO1GB0I1T2 1018 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 PGK2P07205 417 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 DMC1Q14565 340 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 C6orf10Q5SRN2 563 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 STKLD1Q8NE28 680 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 SLC25A13Q9UJS0 675 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 DIS3Q9Y2L1 958 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 MIF4GDA9UHW6 222 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 CCDC188H7C350 402 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 HIST1H2AGP0C0S8 130 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 HIST1H2ADP20671 130 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 EFNA5P52803 228 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 KRT72Q14CN4 511 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 HIF1AQ16665 826 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 DGKDQ16760 1214 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 PTRHD1Q6GMV3 140 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 FBXO38Q6PIJ6 1188 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 CPB2Q96IY4 423 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 HIST1H2AHQ96KK5 128 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 HIST1H2AJQ99878 128 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 H2AFJQ9BTM1 129 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 STX18Q9P2W9 335 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 STK36Q9NRP7 1315 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 ENO1P06733 434 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 SEPT1Q8WYJ6 367 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 XPO7Q9UIA9 1087 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 H0Y626 953 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 ALDH7A1P49419 539 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 KLK7P49862 253 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 P3H1Q32P28 736 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 KCNV1Q6PIU1 500 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 ISCA1Q9BUE6 129 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 SNX5Q9Y5X3 404 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 SLC30A1Q9Y6M5 507 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 TTLL13PA6NNM8 815 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 USP27XA6NNY8 438 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 MZF1P28698 734 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 KDSRQ06136 332 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 SNRNP35Q16560 246 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 TRIM48Q8IWZ4 208 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 SLC35G2Q8TBE7 412 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 PTPRN2Q92932 1015 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.672e-6■■■□□ 16
SHPRH-206ENST00000438092 METTL5Q9NRN9 209 aaKnown RBP10.87□□□□□ -0.67
SHPRH-206ENST00000438092 ARHGEF38Q9NXL2 777 aa10.87□□□□□ -0.67
SHPRH-206ENST00000438092 C3orf70A6NLC5 250 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 C5orf58C9J3I9 102 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 VTNP04004 478 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 SKIP12755 728 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 TCN1P20061 433 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 BRD2P25440 801 aaKnown RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ZNF543Q08ER8 600 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ARMC6Q6NXE6 501 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 IFNEQ86WN2 208 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-206ENST00000438092 ARHGAP18Q8N392 663 aa10.86□□□□□ -0.67
SHPRH-206ENST00000438092 KAT2BQ92831 832 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms