RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-202ENST00000437003 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMEM116-202ENST00000437003 THAP12O43422 761 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 DLG4P78352 724 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 ROR2Q01974 943 aaKnown RBP13.17□□□□□ -0.3
TMEM116-202ENST00000437003 STYK1Q6J9G0 422 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 MAGEB18Q96M61 343 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 LRRC37BQ96QE4 947 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 APEX2Q9UBZ4 518 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 SLX4Q8IY92 1834 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 COQ9O75208 318 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 FTLP02792 175 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-202ENST00000437003 ATP5DP30049 168 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
TMEM116-202ENST00000437003 PPP2R5CQ13362 524 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 TSNAXIP1Q2TAA8 658 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 TRMT10CQ7L0Y3 403 aaKnown RBP13.17□□□□□ -0.3
TMEM116-202ENST00000437003 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 MFN1Q8IWA4 741 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 ZNF577Q9BSK1 485 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 GPR88Q9GZN0 384 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 LRMDAQ9H2I8 198 aa13.17□□□□□ -0.3
TMEM116-202ENST00000437003 GTPBP10A4D1E9 387 aaKnown RBP13.16□□□□□ -0.3
TMEM116-202ENST00000437003 PLSCR1O15162 318 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 ECEL1O95672 775 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 ARP10275 920 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-202ENST00000437003 PRELPP51888 382 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-202ENST00000437003 KRT17Q04695 432 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 DENND2DQ9H6A0 471 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-202ENST00000437003 UBE2TQ9NPD8 197 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-202ENST00000437003 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 K7ENM7 598 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 SPOPO43791 374 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-202ENST00000437003 CHRNB2P17787 502 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 SLC15A2Q16348 729 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 LXNQ9BS40 222 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 TRIM4Q9C037 500 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 UNC45AQ9H3U1 944 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
TMEM116-202ENST00000437003 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
TMEM116-202ENST00000437003 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 CLDN3O15551 220 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 ALAS1P13196 640 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 HSPA6P17066 643 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 GCLMP48507 274 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 STRN3Q13033 797 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 TMED2Q15363 201 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 PARP6Q2NL67 630 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 SLC13A5Q86YT5 568 aaPredicted RBP13.15□□□□□ -0.3
TMEM116-202ENST00000437003 AGGF1Q8N302 714 aaeCLIP13.15□□□□□ -0.3
TMEM116-202ENST00000437003 CXorf38Q8TB03 319 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 CHURC1Q8WUH1 139 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 NACC1Q96RE7 527 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 FIZ1Q96SL8 496 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 ACP6Q9NPH0 428 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 NAALADL1Q9UQQ1 740 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 RASA4BC9J798 803 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 TP73O15350 636 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 RASA4O43374 803 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 NPTXRO95502 500 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 TTC4O95801 387 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 WDR4P57081 412 aaKnown RBP13.15□□□□□ -0.3
TMEM116-202ENST00000437003 BFSP1Q12934 665 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
TMEM116-202ENST00000437003 RCN2Q14257 317 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 CCDC6Q16204 474 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 STXBP4Q6ZWJ1 553 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 GALNT15Q8N3T1 639 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 C9orf72Q96LT7 481 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 FAM210AQ96ND0 272 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 ANKRD27Q96NW4 1050 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 NMRK1Q9NWW6 199 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 MRPL11Q9Y3B7 192 aaKnown RBP13.15□□□□□ -0.3
TMEM116-202ENST00000437003 MYH11P35749 1972 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 ATP8B3O60423 1300 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 EMSYQ7Z589 1322 aa13.15□□□□□ -0.3
TMEM116-202ENST00000437003 MIF4GDA9UHW6 222 aaKnown RBP13.15□□□□□ -0.31
TMEM116-202ENST00000437003 ALDH3A1P30838 453 aa13.15□□□□□ -0.31
TMEM116-202ENST00000437003 LAMB3Q13751 1172 aa13.15□□□□□ -0.31
TMEM116-202ENST00000437003 RFWD3Q6PCD5 774 aa13.15□□□□□ -0.31
TMEM116-202ENST00000437003 NSMFQ6X4W1 530 aa13.15□□□□□ -0.31
TMEM116-202ENST00000437003 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms