RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SLC2A3P11169 496 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SLC11A2P49281 568 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PDIA6Q15084 440 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 DGKDQ16760 1214 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SARM1Q6SZW1 724 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 ZC3H18Q86VM9 953 aaKnown RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 RNF149Q8NC42 400 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SLC13A1Q9BZW2 595 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PSMA4P25789 261 aaKnown RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 NNTQ13423 1086 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 COBLL1Q53SF7 1204 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 MRPS31Q92665 395 aaKnown RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PTPRN2Q92932 1015 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PARVBQ9HBI1 364 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 IL18RAPO95256 599 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 PABPC5Q96DU9 382 aaKnown RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 GALNT8Q9NY28 637 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 LNPEPQ9UIQ6 1025 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 DBNLQ9UJU6 430 aaKnown RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 F8W810 466 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 DEAF1O75398 565 aaPredicted RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 CTSHP09668 335 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 LIFRP42702 1097 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 SMYD4Q8IYR2 804 aaPredicted RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 LPAR1Q92633 364 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 HEMGNQ9BXL5 484 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 SLC16A1P53985 500 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 PLCL1Q15111 1095 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 STK33Q9BYT3 514 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 KRT84Q9NSB2 600 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 DYNC1LI2O43237 492 aaPredicted RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 NDUFA10O95299 355 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 SH3RF3Q8TEJ3 882 aaPredicted RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 DYDC2Q96IM9 177 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 EIF4E1BA6NMX2 242 aaKnown RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 PTK6Q13882 451 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 PHACTR4Q8IZ21 702 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 CAMKK1Q8N5S9 505 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 ELMO2Q96JJ3 720 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF24P17028 368 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 CSTF3Q12996 717 aaKnown RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 BFSP2Q13515 415 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
SCN4A-201ENST00000435607 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 CRLS1Q9UJA2 301 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
SCN4A-201ENST00000435607 CCDC195A0A1B0GUA6 201 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 MTSS1O43312 755 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 UBE3AQ05086 875 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 STARD3Q14849 445 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 EMBQ6PCB8 327 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ATP6V0D2Q8N8Y2 350 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ST13P5Q8NFI4 369 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF507Q8TCN5 953 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 C18orf8Q96DM3 657 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 AHCYL2Q96HN2 611 aaKnown RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 STOML1Q9UBI4 398 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ZFYVE16Q7Z3T8 1539 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 CAMKK2Q96RR4 588 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 DDX28Q9NUL7 540 aaKnown RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF229Q9UJW7 825 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 AURKCQ9UQB9 309 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 YWHAZP63104 245 aaKnown RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 FAM162AQ96A26 154 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 LXNQ9BS40 222 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 MRPL1Q9BYD6 325 aaKnown RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 CAPN10Q9HC96 672 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 MYO1GB0I1T2 1018 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 F5H423 210 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 AGBL1Q96MI9 1066 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 CINPQ9BW66 212 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 TEX13BQ9BXU2 312 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 PUS3Q9BZE2 481 aaKnown RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 PCDHB12Q9Y5F1 795 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ABCA5Q8WWZ7 1642 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 DYNC1I2Q13409 638 aaKnown RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 SRLQ86TD4 932 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ADCK1Q86TW2 530 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 RFWD2Q8NHY2 731 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ZSCAN18Q8TBC5 510 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ADNPQ9H2P0 1102 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ZSWIM5Q9P217 1185 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ADAMTS1Q9UHI8 967 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 PLEKHG1Q9ULL1 1385 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 AFF2P51816 1311 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 YWHAQP27348 245 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF177Q13360 481 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 C10orf120Q5SQS8 335 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 LVRNQ6Q4G3 990 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 C19orf60Q96EN9 201 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms