RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 C2CD2Q9Y426 696 aa19.96■□□□□ 0.79
HLA-F-220ENST00000434407 SF3B1O75533 1304 aaKnown RBP eCLIP19.96■□□□□ 0.79
HLA-F-220ENST00000434407 MTCL1Q9Y4B5 1905 aaKnown RBP19.96■□□□□ 0.79
HLA-F-220ENST00000434407 PODXLO00592 558 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 PER2O15055 1255 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 B3GAT3O94766 335 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 IL18RAPO95256 599 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 GLP2RO95838 553 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 SPAG1Q07617 926 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 ELAVL2Q12926 359 aaKnown RBP19.95■□□□□ 0.78
HLA-F-220ENST00000434407 USP41Q3LFD5 358 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 SPATA1Q5VX52 437 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 JADE1Q6IE81 842 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 TMEM184AQ6ZMB5 413 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 RBM23Q86U06 439 aaKnown RBP19.95■□□□□ 0.78
HLA-F-220ENST00000434407 GPD1LQ8N335 351 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 CCDC47Q96A33 483 aaKnown RBP19.95■□□□□ 0.78
HLA-F-220ENST00000434407 KCTD10Q9H3F6 313 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 PCIF1Q9H4Z3 704 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 HSPBP1Q9NZL4 362 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 TUBGCP4Q9UGJ1 667 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 SSX2IPQ9Y2D8 614 aa19.95■□□□□ 0.78
HLA-F-220ENST00000434407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.94■□□□□ 0.78
HLA-F-220ENST00000434407 XPOTO43592 962 aaKnown RBP19.94■□□□□ 0.78
HLA-F-220ENST00000434407 CLASP2O75122 1294 aaKnown RBP19.94■□□□□ 0.78
HLA-F-220ENST00000434407 NFICP08651 508 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 GLUD2P49448 558 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 WNT7BP56706 349 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 HS2ST1Q7LGA3 356 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 NT5DC4Q86YG4 428 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 VN1R2Q8NFZ6 395 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 HASPINQ8TF76 798 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 GSDMAQ96QA5 445 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 IGFLR1Q9H665 355 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 RXFP1Q9HBX9 757 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 MRPL17Q9NRX2 175 aaKnown RBP19.94■□□□□ 0.78
HLA-F-220ENST00000434407 CLDND1Q9NY35 253 aa19.94■□□□□ 0.78
HLA-F-220ENST00000434407 C5orf42Q9H799 3197 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 GOLGA8IPA6NC78 632 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 GOLGA8JA6NMD2 632 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 LINC01565O15544 149 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 URODP06132 367 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 TFF2Q03403 129 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 TMEM132DQ14C87 1099 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 EFCAB13Q8IY85 973 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 TMEM130Q8N3G9 435 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 GOLGA5Q8TBA6 731 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 FAM212AQ96EL1 285 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 KIAA1586Q9HCI6 787 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 DMAC2Q9NW81 257 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 PCDHA5Q9Y5H7 936 aa19.93■□□□□ 0.78
HLA-F-220ENST00000434407 TCF20Q9UGU0 1960 aaKnown RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 PDXKO00764 312 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 CLIC2O15247 247 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 KINO60870 393 aaKnown RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 TBX10O75333 385 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 CNPP09543 421 aaKnown RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 FGFR3P22607 806 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 MRPS5P82675 430 aaKnown RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 DLX2Q07687 328 aaPredicted RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 LEXMQ3ZCV2 418 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 SLC9A9Q8IVB4 645 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 GUF1Q8N442 669 aaKnown RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 BEST2Q8NFU1 509 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 PIK3R5Q8WYR1 880 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 MSLNLQ96KJ4 702 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 B3GALT6Q96L58 329 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 KLHL5Q96PQ7 755 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 TTPALQ9BTX7 342 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 RBAKQ9NYW8 714 aaPredicted RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 CLEC1BQ9P126 229 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 FNIP2Q9P278 1114 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 HOOK1Q9UJC3 728 aaKnown RBP19.92■□□□□ 0.78
HLA-F-220ENST00000434407 PLXNA3P51805 1871 aa19.92■□□□□ 0.78
HLA-F-220ENST00000434407 ANO9A1A5B4 782 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 ZNF233A6NK53 670 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 TRAPPC3O43617 180 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 PRPF40AO75400 957 aaKnown RBP19.91■□□□□ 0.78
HLA-F-220ENST00000434407 KIF20AO95235 890 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 SMC2O95347 1197 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 C1RP00736 705 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 KCNA5P22460 613 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 BRCC3P46736 316 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 AARSP49588 968 aaKnown RBP eCLIP19.91■□□□□ 0.78
HLA-F-220ENST00000434407 GUCY2FP51841 1108 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 AAK1Q2M2I8 961 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 COBLL1Q53SF7 1204 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 RTP2Q5QGT7 225 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 FAM171A1Q5VUB5 890 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 CBWD2Q8IUF1 395 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 XXYLT1Q8NBI6 393 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 SLC22A17Q8WUG5 538 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 SUSD3Q96L08 255 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 ASB2Q96Q27 587 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 EMILIN2Q9BXX0 1053 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.91■□□□□ 0.78
HLA-F-220ENST00000434407 RMND1Q9NWS8 449 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 TRAF3IP3Q9Y228 551 aa19.91■□□□□ 0.78
HLA-F-220ENST00000434407 HCFC2Q9Y5Z7 792 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms