RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TMEM110-MUSTN1A8MSY1 372 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 DDX3YO15523 660 aaKnown RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 TBXAS1P24557 533 aaPredicted RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 SLC7A5Q01650 507 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 TNFAIP2Q03169 654 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 POU5F1BQ06416 359 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 DGKDQ16760 1214 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 FAM187BQ17R55 369 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 ACAD10Q6JQN1 1059 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 CHADLQ6NUI6 762 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 C11orf63Q6NUN7 778 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 TMEM270Q6UE05 265 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 IFNLR1Q8IU57 520 aaPredicted RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 IMPG2Q9BZV3 1241 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 FLRT1Q9NZU1 646 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 L1RE1Q9UN81 338 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 NOC2LQ9Y3T9 749 aaKnown RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 PCDHB2Q9Y5E7 798 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 TRIP12Q14669 1992 aaPredicted RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 RALGAPA2Q2PPJ7 1873 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 MANSC4A6NHS7 340 aaPredicted RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 ASS1P00966 412 aaKnown RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 CYP1A2P05177 515 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 CXCL8P10145 99 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 MYBL2P10244 700 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 TMOD1P28289 359 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 MYL6P60660 151 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 TFAMQ00059 246 aaKnown RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 DUOXA2Q1HG44 320 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 MARCH8Q5T0T0 291 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 MSL3Q8N5Y2 521 aaKnown RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 RBBP8NLQ8NC74 664 aaPredicted RBP20.96■□□□□ 0.95
VRK2-205ENST00000432057 ACTRT1Q8TDG2 376 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 CPB2Q96IY4 423 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 GTF3C4Q9UKN8 822 aa20.96■□□□□ 0.95
VRK2-205ENST00000432057 GPR25O00155 361 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 PGRMC1O00264 195 aaKnown RBP20.95■□□□□ 0.94
VRK2-205ENST00000432057 MTA2O94776 668 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 TMEM191BP0C7N4 346 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 BPIFB4P59827 614 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 ZNF677Q86XU0 584 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 LENG1Q96BZ8 264 aaPredicted RBP20.95■□□□□ 0.94
VRK2-205ENST00000432057 KRT12Q99456 494 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 NUP85Q9BW27 656 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 PDZD7Q9H5P4 517 aa20.95■□□□□ 0.94
VRK2-205ENST00000432057 UNGP13051 313 aaPredicted RBP20.94■□□□□ 0.94
VRK2-205ENST00000432057 DCAF12L1Q5VU92 463 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 RASGEF1CQ8N431 466 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 UBR7Q8N806 425 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 ZNF564Q8TBZ8 553 aaPredicted RBP20.94■□□□□ 0.94
VRK2-205ENST00000432057 NLRP7Q8WX94 980 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.94■□□□□ 0.94
VRK2-205ENST00000432057 TMEM59LQ9UK28 342 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 ALG6Q9Y672 507 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 MAP2K7O14733 419 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 DYNC1LI2O43237 492 aaPredicted RBP20.94■□□□□ 0.94
VRK2-205ENST00000432057 ZEB2O60315 1214 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 GNA15P30679 374 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 MESDQ14696 234 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 HDXQ7Z353 690 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 PPP1R13LQ8WUF5 828 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 BTBD6Q96KE9 485 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 CALR3Q96L12 384 aaKnown RBP20.94■□□□□ 0.94
VRK2-205ENST00000432057 SCLT1Q96NL6 688 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 RPF1Q9H9Y2 349 aaKnown RBP20.94■□□□□ 0.94
VRK2-205ENST00000432057 STIM2Q9P246 746 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 CNTN6Q9UQ52 1028 aa20.94■□□□□ 0.94
VRK2-205ENST00000432057 B4GALT4O60513 344 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 TNNC2P02585 160 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 CFHP08603 1231 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 SSTR3P32745 418 aaPredicted RBP20.93■□□□□ 0.94
VRK2-205ENST00000432057 TRPC3Q13507 836 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 CCL14Q16627 93 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 CCNI2Q6ZMN8 369 aaPredicted RBP20.93■□□□□ 0.94
VRK2-205ENST00000432057 CPA5Q8WXQ8 436 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 RUBCNQ92622 972 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 ANKRD36BP1Q96IX9 119 aa20.93■□□□□ 0.94
VRK2-205ENST00000432057 CNOT8Q9UFF9 292 aaKnown RBP20.93■□□□□ 0.94
VRK2-205ENST00000432057 MEFVO15553 781 aaPredicted RBP20.92■□□□□ 0.94
VRK2-205ENST00000432057 MCF2P10911 925 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 ARF4P18085 180 aaPredicted RBP20.92■□□□□ 0.94
VRK2-205ENST00000432057 TNNC1P63316 161 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 MAP9Q49MG5 647 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 GLE1Q53GS7 698 aaKnown RBP20.92■□□□□ 0.94
VRK2-205ENST00000432057 NAA35Q5VZE5 725 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 OLFML2BQ68BL8 750 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 RGMBQ6NW40 437 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 AP1M1Q9BXS5 423 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 NIF3L1Q9GZT8 377 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 PLEKHA4Q9H4M7 779 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 ZCCHC17Q9NP64 241 aaKnown RBP20.92■□□□□ 0.94
VRK2-205ENST00000432057 SETD4Q9NVD3 440 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 GNEQ9Y223 722 aaKnown RBP20.92■□□□□ 0.94
VRK2-205ENST00000432057 IL18RAPO95256 599 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 CYP1A1P04798 512 aaPredicted RBP20.92■□□□□ 0.94
VRK2-205ENST00000432057 STAG3L1P0CL83 205 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 CYP2C19P33261 490 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 IRX5P78411 483 aaPredicted RBP20.92■□□□□ 0.94
VRK2-205ENST00000432057 ZNF699Q32M78 642 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 SCARA5Q6ZMJ2 495 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms