RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 USP27XA6NNY8 438 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ZBTB11O95625 1053 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 NFICP08651 508 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 POLR2MP0CAP2 368 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 DBTP11182 482 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CAPN3P20807 821 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 LIFRP42702 1097 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SLC9A3P48764 834 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RELQ04864 619 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 DDR1Q08345 913 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 IKBKEQ14164 716 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 EZH2Q15910 746 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 FAM209BQ5JX69 171 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 MEI1Q5TIA1 1274 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SLC30A6Q6NXT4 461 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 C16orf59Q7L2K0 433 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ZGPATQ8N5A5 531 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 LRRN4CLQ8ND94 238 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 DGCR14Q96DF8 476 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ERLEC1Q96DZ1 483 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SRCIN1Q9C0H9 1055 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TGIF2Q9GZN2 237 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 GHITMQ9H3K2 345 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 DLGAP2Q9P1A6 1054 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TRAF3IP3Q9Y228 551 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 MAFBQ9Y5Q3 323 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 A0A087WZG4 1122 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 WDR91A4D1P6 747 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 STX16-NPEPL1H3BU86 382 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TLR3O15455 904 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 DDX3YO15523 660 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ALDH4A1P30038 563 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 STAT6P42226 847 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CLK3P49761 638 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RGS7P49802 495 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PRKG2Q13237 762 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CCINQ13939 588 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 GFOD2Q3B7J2 385 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CFAP221Q4G0U5 840 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 NUTM2DQ5VT03 806 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ANKS6Q68DC2 871 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 METTL2BQ6P1Q9 378 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TRIM65Q6PJ69 517 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 LDHAL6AQ6ZMR3 332 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RUFY4Q6ZNE9 571 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CHD1LQ86WJ1 897 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TMC8Q8IU68 726 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TEX47Q8TBZ9 253 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 FBF1Q8TES7 1133 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CA5BP1Q8WTZ4 195 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF606Q8WXB4 792 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 AIFM3Q96NN9 605 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 NUDT12Q9BQG2 462 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 C11orf84Q9BUA3 381 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RNF38Q9H0F5 515 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 MARCH7Q9H992 704 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PCMTD2Q9NV79 361 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SPASTQ9UBP0 616 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 FETUBQ9UGM5 382 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ADAMTS1Q9UHI8 967 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PNMA8BQ9ULN7 279 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 FADS3Q9Y5Q0 445 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TACC3Q9Y6A5 838 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 EMILIN1Q9Y6C2 1016 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TMEM120BA0PK00 339 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 NPIPA7E9PJI5 369 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 H3BQF6 201 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PSMD9O00233 223 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 DCLK1O15075 740 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ICMTO60725 284 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PLEKP08567 350 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 NPIPA8P0DM63 369 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 DLATP10515 647 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CYP2C9P11712 490 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ITGAXP20702 1163 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 MAP4P27816 1152 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SOX6P35712 828 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RGS19P49795 217 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SSTP61278 116 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PRKCEQ02156 737 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 MKRN4PQ13434 485 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 GALNT3Q14435 633 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 FBXO48Q5FWF7 155 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CYB5R2Q6BCY4 276 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 C1orf122Q6ZSJ8 110 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TRIM67Q6ZTA4 783 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 MAEAQ7L5Y9 396 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 FAM160B2Q86V87 743 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ANKMY2Q8IV38 441 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 IQUBQ8NA54 791 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PANK1Q8TE04 598 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SAMD11Q96NU1 681 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 B3GNT4Q9C0J1 378 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 WNT5BQ9H1J7 359 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PIDD1Q9HB75 910 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 POLR3BQ9NW08 1133 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 BTBD7Q9P203 1132 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ARHGAP26Q9UNA1 814 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 KDM2BQ8NHM5 1336 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 A6NJY4 79 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms