RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CCDC150Q8NCX0 1101 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 PLEKHO2Q8TD55 490 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 DDX27Q96GQ7 796 aaKnown RBP11.89□□□□□ -0.51
CHD4-202ENST00000430771 TUBGCP2Q9BSJ2 902 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 IMPG2Q9BZV3 1241 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 PRO3102Q9H379 93 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 TUBGCP4Q9UGJ1 667 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 PLAGL2Q9UPG8 496 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 PCDHA11Q9Y5I1 949 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 PTPRJQ12913 1337 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 CASTOR2A6NHX0 329 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 PES1O00541 588 aaKnown RBP11.88□□□□□ -0.51
CHD4-202ENST00000430771 PODXLO00592 558 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 P4HA2O15460 535 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 PHACTR2O75167 634 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 RPL9P32969 192 aaKnown RBP11.88□□□□□ -0.51
CHD4-202ENST00000430771 PPM1AP35813 382 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 PNPLA4P41247 253 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 GCLMP48507 274 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 DLG4P78352 724 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 TRPC3Q13507 836 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 KRT31Q15323 416 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 NAB2Q15742 525 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 ZBTB6Q15916 424 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 ZACNQ401N2 412 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 COLGALT2Q8IYK4 626 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 OR5B17Q8NGF7 314 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 CXCL16Q9H2A7 254 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 HSD3B7Q9H2F3 369 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 MIOSQ9NXC5 875 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 DPP3Q9NY33 737 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 TAB2Q9NYJ8 693 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 LIMA1Q9UHB6 759 aaKnown RBP11.88□□□□□ -0.51
CHD4-202ENST00000430771 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
CHD4-202ENST00000430771 MRPL42Q9Y6G3 142 aaKnown RBP11.88□□□□□ -0.51
CHD4-202ENST00000430771 TMEM189-UBE2V1I3L0A0 370 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 PMM2O15305 246 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 SERPINC1P01008 464 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 ITGB3P05106 788 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 TPM3P06753 285 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 KRT19P08727 400 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 PAX3P23760 479 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
CHD4-202ENST00000430771 OR1G1P47890 313 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 FMO5P49326 533 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 AFF1P51825 1210 aaKnown RBP11.87□□□□□ -0.51
CHD4-202ENST00000430771 RABGGTBP53611 331 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 COPB1P53618 953 aaKnown RBP11.87□□□□□ -0.51
CHD4-202ENST00000430771 RBP5P82980 135 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 SOX4Q06945 474 aaPredicted RBP11.87□□□□□ -0.51
CHD4-202ENST00000430771 PPP3CAQ08209 521 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 KCNH2Q12809 1159 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 MYO1EQ12965 1108 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 FILIP1LQ4L180 1135 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 VWA3BQ502W6 1294 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 C1orf220Q5T0J3 134 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
CHD4-202ENST00000430771 SV2AQ7L0J3 742 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 TRAPPC11Q7Z392 1133 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 LRRC52Q8N7C0 313 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 C1orf127Q8N9H9 656 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 C18orf25Q96B23 403 aaPredicted RBP11.87□□□□□ -0.51
CHD4-202ENST00000430771 SAMD11Q96NU1 681 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 POP1Q99575 1024 aaKnown RBP11.87□□□□□ -0.51
CHD4-202ENST00000430771 NRDE2Q9H7Z3 1164 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 GOLGA2P5Q9HBQ8 144 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 PCDHB12Q9Y5F1 795 aa11.87□□□□□ -0.51
CHD4-202ENST00000430771 TSC2P49815 1807 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 ARHGEF37A1IGU5 675 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 GTPBP10A4D1E9 387 aaKnown RBP11.86□□□□□ -0.51
CHD4-202ENST00000430771 LGALS16A8MUM7 142 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 GRXCR1A8MXD5 290 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 DDHD2O94830 711 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 C4BPAP04003 597 aaKnown RBP11.86□□□□□ -0.51
CHD4-202ENST00000430771 CA3P07451 260 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 ATP1A3P13637 1013 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 ATICP31939 592 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
CHD4-202ENST00000430771 TAF6P49848 677 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 CLCNKBP51801 687 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 GUCY2FP51841 1108 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 BCAR1P56945 870 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
CHD4-202ENST00000430771 NCOA4Q13772 614 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 UPP1Q16831 310 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 ZNF699Q32M78 642 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 SV2CQ496J9 727 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 C9orf57Q5W0N0 161 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
CHD4-202ENST00000430771 C15orf39Q6ZRI6 1047 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 ZNF280BQ86YH2 543 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 CLP1Q92989 425 aaKnown RBP11.86□□□□□ -0.51
CHD4-202ENST00000430771 COLEC11Q9BWP8 271 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 PBX4Q9BYU1 374 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms