RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 PLEKHH3Q7Z736 793 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 TRPM4Q8TD43 1214 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 MED4Q9NPJ6 270 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 CASS4Q9NQ75 786 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 ENTPD7Q9NQZ7 604 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNX13-203ENST00000428135 PPARGC1AQ9UBK2 798 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 CLCA2Q9UQC9 943 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 FHOD1Q9Y613 1164 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 KRT7P08729 469 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 GTF2H1P32780 548 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 CDR2Q01850 454 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 RFX8Q6ZV50 586 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 ERO1BQ86YB8 467 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 RHOT1Q8IXI2 618 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 TTC8Q8TAM2 541 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 HVCN1Q96D96 273 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.27□□□□□ -0.76
SNX13-203ENST00000428135 DOLKQ9UPQ8 538 aa10.27□□□□□ -0.76
SNX13-203ENST00000428135 NR1D1P20393 614 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 AKT1P31749 480 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 AMACRQ9UHK6 382 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 MYO5BQ9ULV0 1848 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 ADGRB1O14514 1584 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 AGRPO00253 132 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 APRTP07741 180 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 VCAM1P19320 739 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 RGS2P41220 211 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 RAP1GAPP47736 663 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 ALDH1A3P47895 512 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 FMO5P49326 533 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 NAA30Q147X3 362 aaPredicted RBP10.27□□□□□ -0.77
SNX13-203ENST00000428135 NCAPHQ15003 741 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 PDXDC1Q6P996 788 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 RUSC1Q9BVN2 902 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 CYP26B1Q9NR63 512 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 MSH4O15457 936 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 B3GAT3O94766 335 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 NCAM1P13591 858 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 CHRNA3P32297 505 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 BACE1P56817 501 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 FRMD5Q7Z6J6 570 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 DDIASQ8IXT1 998 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 SPIRE2Q8WWL2 714 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
SNX13-203ENST00000428135 DIAPH2O60879 1101 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 KRT37O76014 449 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 COPS2P61201 443 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 PDIA5Q14554 519 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 TKFCQ3LXA3 575 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 ZFPM1Q8IX07 1006 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 SLC35G2Q8TBE7 412 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 PIP4K2CQ8TBX8 421 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 POP1Q99575 1024 aaKnown RBP10.27□□□□□ -0.77
SNX13-203ENST00000428135 DONSONQ9NYP3 566 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 APEX2Q9UBZ4 518 aa10.27□□□□□ -0.77
SNX13-203ENST00000428135 LSM7Q9UK45 103 aaKnown RBP10.27□□□□□ -0.77
SNX13-203ENST00000428135 HBP1O60381 514 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 HSD17B4P51659 736 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 RCAN1P53805 252 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 KRT17Q04695 432 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 RAD51Q06609 339 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 CRLF3Q8IUI8 442 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 TRIM42Q8IWZ5 723 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 HPDLQ96IR7 371 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 YME1L1Q96TA2 773 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 EPAS1Q99814 870 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 EPS15L1Q9UBC2 864 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 POLR1AO95602 1720 aaPredicted RBP10.26□□□□□ -0.77
SNX13-203ENST00000428135 EEF1B2P24534 225 aaKnown RBP10.26□□□□□ -0.77
SNX13-203ENST00000428135 PHEXP78562 749 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 DEUP1Q05D60 604 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 ACBD5Q5T8D3 534 aaPredicted RBP10.26□□□□□ -0.77
SNX13-203ENST00000428135 IZUMO3Q5VZ72 239 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 TTC23LQ6PF05 361 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 PPP2R3CQ969Q6 453 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 GBP5Q96PP8 586 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 METTL5Q9NRN9 209 aaKnown RBP10.26□□□□□ -0.77
SNX13-203ENST00000428135 AIPL1Q9NZN9 384 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 CAMTA1Q9Y6Y1 1673 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 CASTOR2A6NHX0 329 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 PDXKO00764 312 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 DDHD2O94830 711 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 MDH1BQ5I0G3 518 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 GPAT2Q6NUI2 795 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 EPM2AIP1Q7L775 607 aaPredicted RBP10.26□□□□□ -0.77
SNX13-203ENST00000428135 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 BTBD6Q96KE9 485 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 VCX3AQ9NNX9 186 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 NMRK2Q9NPI5 230 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 MAGEB2O15479 319 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 ICAM1P05362 532 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 ESRRAP11474 423 aaPredicted RBP10.26□□□□□ -0.77
SNX13-203ENST00000428135 PDCLQ13371 301 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 DGKZQ13574 1117 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 MIB1Q86YT6 1006 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 TIMM13Q9Y5L4 95 aaPredicted RBP10.26□□□□□ -0.77
SNX13-203ENST00000428135 PPLO60437 1756 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms