RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 BIN2Q9UBW5 565 aaPredicted RBP5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 ARMCX3Q9UH62 379 aaPredicted RBP5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 PCYOX1Q9UHG3 505 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 HAO1Q9UJM8 370 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 DBNLQ9UJU6 430 aaKnown RBP5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 PHTF1Q9UMS5 762 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 POLIQ9UNA4 740 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 STX8Q9UNK0 236 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 SCAF8Q9UPN6 1271 aaKnown RBP5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 EXOC7Q9UPT5 735 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 ITM2BQ9Y287 266 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF652Q9Y2D9 606 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 MAP3K2Q9Y2U5 619 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 SNX9Q9Y5X1 595 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 DUSP10Q9Y6W6 482 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 UBE4BO95155 1302 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 XDHP47989 1333 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 PCDH11YQ9BZA8 1340 aa5.94□□□□□ -1.46
VTI1BP4-201ENST00000427516 hCG_2014768A0A024R1R8 64 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 A0A088AWK7 358 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZSCAN5CA6NGD5 496 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 MOXD2PA6NHM9 499 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 BTBD18B2RXH4 712 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM47E-STBD1D6RA91 191 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 GOLGA8MH3BSY2 632 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 BACH1O14867 736 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF263O14978 683 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ATP2A1O14983 1001 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TM9SF1O15321 606 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC26A4O43511 780 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TIMM44O43615 452 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PDE8AO60658 829 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 EDF1O60869 148 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 IDH1O75874 414 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CIAO1O76071 339 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT75O95678 551 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 AVPP01185 164 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 IL1BP01584 269 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 APOEP02649 317 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 SHBGP04278 402 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 H2AFZP0C0S5 128 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZCCHC18P0CG32 403 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CDK4P11802 303 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 JUNDP17535 347 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 NDUFV2P19404 249 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ACAT1P24752 427 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 HOXA10P31260 410 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CDK9P50750 372 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 HNRNPFP52597 415 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PLTPP55058 493 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CSE1LP55060 971 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CDC16Q13042 620 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 DNAJC3Q13217 504 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTLL12Q14166 644 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 WTAPQ15007 396 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PDK3Q15120 406 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ALX1Q15699 326 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 RGS21Q2M5E4 152 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF829Q3KNS6 432 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 WDR72Q3MJ13 1102 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 BOLA3Q53S33 107 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 EAPPQ56P03 285 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TMEM63BQ5T3F8 832 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 H2AFVQ71UI9 128 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CLNKQ7Z7G1 428 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 DHDDSQ86SQ9 333 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 RETREG3Q86VR2 466 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PDSS2Q86YH6 399 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 MCF2L2Q86YR7 1114 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 JAMLQ86YT9 394 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CACTIN-AS1Q8N1I8 211 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CRIPAKQ8N1N5 446 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CCDC24Q8N4L8 307 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 MARVELD2Q8N4S9 558 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM133AQ8N9E0 248 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PDPRQ8NCN5 879 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TNIP2Q8NFZ5 429 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CALML6Q8TD86 181 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PRPF31Q8WWY3 499 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 APBB2Q92870 758 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 HPS3Q969F9 1004 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRIM63Q969Q1 353 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 UTP4Q969X6 686 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 NMD3Q96D46 503 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 EPSTI1Q96J88 318 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PRPF18Q99633 342 aaKnown RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 STK33Q9BYT3 514 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 RAB34Q9BZG1 259 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TANGO6Q9C0B7 1094 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CCSER1Q9C0I3 900 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZCWPW1Q9H0M4 648 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 RETREG1Q9H6L5 497 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF696Q9H7X3 374 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PARVGQ9HBI0 331 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 MAGEE1Q9HCI5 957 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CABP5Q9NP86 173 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM207AQ9NSI2 230 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZDHHC18Q9NUE0 388 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 RRN3Q9NYV6 651 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms