RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 DGKDQ16760 1214 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 DUOXA2Q1HG44 320 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 TMEM270Q6UE05 265 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 ACTRT1Q8TDG2 376 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 NOC2LQ9Y3T9 749 aaKnown RBP23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 DDX3YO15523 660 aaKnown RBP23.31■■□□□ 1.32
CNEP1R1-202ENST00000427478 HOXD8P13378 290 aaPredicted RBP23.31■■□□□ 1.32
CNEP1R1-202ENST00000427478 BPIFB4P59827 614 aa23.31■■□□□ 1.32
CNEP1R1-202ENST00000427478 TNFAIP2Q03169 654 aa23.31■■□□□ 1.32
CNEP1R1-202ENST00000427478 MORN1Q5T089 497 aa23.31■■□□□ 1.32
CNEP1R1-202ENST00000427478 EFCAB13Q8IY85 973 aa23.31■■□□□ 1.32
CNEP1R1-202ENST00000427478 TMEM192Q8IY95 271 aa23.31■■□□□ 1.32
CNEP1R1-202ENST00000427478 PGRMC1O00264 195 aaKnown RBP23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 ASS1P00966 412 aaKnown RBP23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 TMEM191BP0C7N4 346 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 MYBL2P10244 700 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 MYL6P60660 151 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 POU5F1BQ06416 359 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 MAP2K5Q13163 448 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 C11orf63Q6NUN7 778 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 HDXQ7Z353 690 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 ZNF677Q86XU0 584 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 CPB2Q96IY4 423 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 KRT12Q99456 494 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 NUP85Q9BW27 656 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 GTF3C4Q9UKN8 822 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 CYP1A2P05177 515 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 CXCL8P10145 99 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 AMHR2Q16671 573 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 FAM187BQ17R55 369 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 MAP9Q49MG5 647 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 MARCH8Q5T0T0 291 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 MSL3Q8N5Y2 521 aaKnown RBP23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 RBBP8NLQ8NC74 664 aaPredicted RBP23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 ZNF564Q8TBZ8 553 aaPredicted RBP23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 NLRP7Q8WX94 980 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 CALR3Q96L12 384 aaKnown RBP23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.3■■□□□ 1.327e-7■■□□□ 13.4
CNEP1R1-202ENST00000427478 ALG6Q9Y672 507 aa23.3■■□□□ 1.32
CNEP1R1-202ENST00000427478 MANSC4A6NHS7 340 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 GPR25O00155 361 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 MAP2K7O14733 419 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 MTA2O94776 668 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 MESDQ14696 234 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 IFNLR1Q8IU57 520 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 SCLT1Q96NL6 688 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 FLRT1Q9NZU1 646 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 STIM2Q9P246 746 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 TMEM59LQ9UK28 342 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 DYNC1LI2O43237 492 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 ZEB2O60315 1214 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 UNGP13051 313 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 GNA15P30679 374 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 TRPC3Q13507 836 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 DCAF12L1Q5VU92 463 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 CHADLQ6NUI6 762 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 CCNI2Q6ZMN8 369 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 RASGEF1CQ8N431 466 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 BTBD6Q96KE9 485 aa23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 RPF1Q9H9Y2 349 aaKnown RBP23.29■■□□□ 1.32
CNEP1R1-202ENST00000427478 SSTR3P32745 418 aaPredicted RBP23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 TNNC1P63316 161 aa23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 GLE1Q53GS7 698 aaKnown RBP23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 KLHL7Q8IXQ5 586 aa23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 CPA5Q8WXQ8 436 aa23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 RUBCNQ92622 972 aa23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 LENG1Q96BZ8 264 aaPredicted RBP23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 AP1M1Q9BXS5 423 aa23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 PDZD7Q9H5P4 517 aa23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 CNOT8Q9UFF9 292 aaKnown RBP23.28■■□□□ 1.32
CNEP1R1-202ENST00000427478 B4GALT4O60513 344 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 TNNC2P02585 160 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 CASP8Q14790 479 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 NAA35Q5VZE5 725 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 PPP1R13LQ8WUF5 828 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 ANKRD36BP1Q96IX9 119 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 PLEKHA4Q9H4M7 779 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 CNTN6Q9UQ52 1028 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 CFHP08603 1231 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 ARF4P18085 180 aaPredicted RBP23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 TNNT3P45378 269 aaPredicted RBP23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 SGSM1Q2NKQ1 1148 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 PASD1Q8IV76 773 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 ST7Q9NRC1 585 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 SETD4Q9NVD3 440 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 UVRAGQ9P2Y5 699 aa23.27■■□□□ 1.32
CNEP1R1-202ENST00000427478 STAG3L1P0CL83 205 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 CD58P19256 250 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 COMTP21964 271 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 CCL14Q16627 93 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 UBR7Q8N806 425 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 CYFIP2Q96F07 1278 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 NIF3L1Q9GZT8 377 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 THAP12O43422 761 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 IL18RAPO95256 599 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 CYP1A1P04798 512 aaPredicted RBP23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 MCF2P10911 925 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZNF699Q32M78 642 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 KIAA0319LQ8IZA0 1049 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 MCOLN2Q8IZK6 566 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms