RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 IGSF9Q9P2J2 1179 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 MTMR6Q9Y217 621 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 MYH11P35749 1972 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 H7C4K7 107 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 OGTO15294 1046 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 C8AP07357 584 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 CXCL8P10145 99 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 TKTP29401 623 aaKnown RBP11.09□□□□□ -0.63
COMMD1-202ENST00000427417 OR1D2P34982 312 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 BRCC3P46736 316 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 GTF2BQ00403 316 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 NHLH1Q02575 133 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 TDGQ13569 410 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 SLC39A14Q15043 492 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 SEZ6Q53EL9 994 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 SPECC1Q5M775 1068 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
COMMD1-202ENST00000427417 FAM173BQ6P4H8 233 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 CD300LGQ6UXG3 332 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 SV2BQ7L1I2 683 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 ALYREFQ86V81 257 aaKnown RBP11.09□□□□□ -0.63
COMMD1-202ENST00000427417 MAP4K3Q8IVH8 894 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 C3orf58Q8NDZ4 430 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 APPL2Q8NEU8 664 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 LRRC15Q8TF66 581 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 HVCN1Q96D96 273 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 PHOX2BQ99453 314 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 MSTO1Q9BUK6 570 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 RPF1Q9H9Y2 349 aaKnown RBP11.09□□□□□ -0.63
COMMD1-202ENST00000427417 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 EPS15L1Q9UBC2 864 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 UBQLN1Q9UMX0 589 aaKnown RBP11.09□□□□□ -0.63
COMMD1-202ENST00000427417 CDY1Q9Y6F8 540 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 ZFP37Q9Y6Q3 630 aaPredicted RBP11.09□□□□□ -0.63
COMMD1-202ENST00000427417 WDFY4Q6ZS81 3184 aa11.09□□□□□ -0.63
COMMD1-202ENST00000427417 MTCL1Q9Y4B5 1905 aaKnown RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 TTC26A0AVF1 554 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 N4BP1O75113 896 aaKnown RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 HSP90AA1P07900 732 aaKnown RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 POU2F2P09086 479 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 CYP3A5P20815 502 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 ELF1P32519 619 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 MCM4P33991 863 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 STAT6P42226 847 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 NASPP49321 788 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 STK38Q15208 465 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 SLFN12LQ6IEE8 588 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 SLC8B1Q6J4K2 584 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 USP49Q70CQ1 688 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 GET4Q7L5D6 327 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 DYMQ7RTS9 669 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 CD302Q8IX05 232 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 ST13P5Q8NFI4 369 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 SLC7A14Q8TBB6 771 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 C18orf25Q96B23 403 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 USP28Q96RU2 1077 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 OXCT2Q9BYC2 517 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-202ENST00000427417 KCNK12Q9HB15 430 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 DUSP12Q9UNI6 340 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.64
COMMD1-202ENST00000427417 A0A0B4J269 797 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 I3L4J1 428 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 ADAM12O43184 909 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 GAP43P17677 238 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 PAX3P23760 479 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 FSHRP23945 695 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 NMT1P30419 496 aaKnown RBP11.07□□□□□ -0.64
COMMD1-202ENST00000427417 LRPAP1P30533 357 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 NUBP1P53384 320 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
COMMD1-202ENST00000427417 ZNF280DQ6N043 979 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 GRASPQ7Z6J2 395 aaPredicted RBP11.07□□□□□ -0.64
COMMD1-202ENST00000427417 TMEM130Q8N3G9 435 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 ZNF461Q8TAF7 563 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 RSAD2Q8WXG1 361 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 DDX12PQ92771 950 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 SUSD3Q96L08 255 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 FIZ1Q96SL8 496 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 HAPLN2Q9GZV7 340 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 MFSD1Q9H3U5 465 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 MRPL44Q9H9J2 332 aaKnown RBP11.07□□□□□ -0.64
COMMD1-202ENST00000427417 FAM86C1Q9NVL1 165 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 TUBGCP4Q9UGJ1 667 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 PCDHB8Q9UN66 801 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 POLIQ9UNA4 740 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 EXOC7Q9UPT5 735 aa11.07□□□□□ -0.64
COMMD1-202ENST00000427417 CITO14578 2027 aa11.06□□□□□ -0.64
COMMD1-202ENST00000427417 ARHGEF37A1IGU5 675 aa11.06□□□□□ -0.64
COMMD1-202ENST00000427417 LACTBL1A8MY62 500 aa11.06□□□□□ -0.64
COMMD1-202ENST00000427417 CCL16O15467 120 aa11.06□□□□□ -0.64
COMMD1-202ENST00000427417 MEFVO15553 781 aaPredicted RBP11.06□□□□□ -0.64
COMMD1-202ENST00000427417 NARSO43776 548 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms