RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 FITM2Q8N6M3 262 aa15.31■□□□□ 0.04
ERCC3-202ENST00000426778 FAM151AQ8WW52 585 aa15.31■□□□□ 0.04
ERCC3-202ENST00000426778 FHDC1Q9C0D6 1143 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-202ENST00000426778 YY1AP1Q9H869 796 aa15.31■□□□□ 0.04
ERCC3-202ENST00000426778 TRPC5Q9UL62 973 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-202ENST00000426778 NAALADL1Q9UQQ1 740 aa15.31■□□□□ 0.04
ERCC3-202ENST00000426778 USP15Q9Y4E8 981 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-202ENST00000426778 RIPK3Q9Y572 518 aa15.31■□□□□ 0.04
ERCC3-202ENST00000426778 CENPFP49454 3210 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 P4HA2O15460 535 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 MTA2O94776 668 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 GGPS1O95749 300 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 ALDH5A1P51649 535 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-202ENST00000426778 NCKAP1LP55160 1127 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 NCALDP61601 193 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 CYP24A1Q07973 514 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 PGM5Q15124 567 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 ZNF394Q53GI3 561 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 SPIRE2Q8WWL2 714 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 UVRAGQ9P2Y5 699 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 FEM1BQ9UK73 627 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 DOCK5Q9H7D0 1870 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 MGAT5Q09328 741 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 TNFAIP8L3Q5GJ75 292 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 IZUMO3Q5VZ72 239 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 CGB2Q6NT52 195 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 RHBDF2Q6PJF5 856 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 TMEM270Q6UE05 265 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 OGFOD1Q8N543 542 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 DDX27Q96GQ7 796 aaKnown RBP15.3■□□□□ 0.04
ERCC3-202ENST00000426778 RUNDC3BQ96NL0 473 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 MCM8Q9UJA3 840 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 UBIAD1Q9Y5Z9 338 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 MYPNQ86TC9 1320 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 KRT16P08779 473 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 PTGER2P43116 358 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 NSFP46459 744 aaKnown RBP15.3■□□□□ 0.04
ERCC3-202ENST00000426778 GPC3P51654 580 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 ITIH4Q14624 930 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 P3H1Q32P28 736 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 SWSAP1Q6NVH7 229 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 C4orf33Q8N1A6 199 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 KCTD17Q8N5Z5 321 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 AGAP11Q8TF27 550 aa15.3■□□□□ 0.04
ERCC3-202ENST00000426778 NSRP1Q9H0G5 558 aaKnown RBP15.3■□□□□ 0.04
ERCC3-202ENST00000426778 GHRP10912 638 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 UNGP13051 313 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 NLRP11P59045 1033 aaKnown RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 PSMC5P62195 406 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 RPL7AP62424 266 aaKnown RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 MYBPC2Q14324 1141 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 ZNF365Q70YC5 407 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 TRMT10CQ7L0Y3 403 aaKnown RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 MAP4K3Q8IVH8 894 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 SLCO1B3Q9NPD5 702 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 GEMIN8Q9NWZ8 242 aaKnown RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 ANKFY1Q9P2R3 1169 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 SAE1Q9UBE0 346 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 SEPT9Q9UHD8 586 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 MUTP22033 750 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 FOXN2P32314 431 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 NEDD9Q14511 834 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 CLUL1Q15846 466 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 TMEM63BQ5T3F8 832 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 ARHGEF16Q5VV41 709 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 FAM160B2Q86V87 743 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 LARGE2Q8N3Y3 721 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 KLHL29Q96CT2 875 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 STMN4Q9H169 189 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-202ENST00000426778 C1orf112Q9NSG2 853 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 WHRNQ9P202 907 aa15.29■□□□□ 0.04
ERCC3-202ENST00000426778 KAT6AQ92794 2004 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 RASA4BC9J798 803 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 RASA4O43374 803 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-202ENST00000426778 GAS8O95995 478 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 FDX1P10109 184 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 EZRP15311 586 aaKnown RBP15.28■□□□□ 0.04
ERCC3-202ENST00000426778 TRAF1Q13077 416 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 DNAJC3Q13217 504 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 ZNF568Q3ZCX4 644 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 MTERF2Q49AM1 385 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 TXNRD3NBQ6F5E7 133 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 MFSD5Q6N075 450 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 TAS1R3Q7RTX0 852 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 SPATA21Q7Z572 469 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 C12orf56Q8IXR9 622 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-202ENST00000426778 TMEM143Q96AN5 459 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 LBHD1Q9BQE6 289 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-202ENST00000426778 C12orf65Q9H3J6 166 aaKnown RBP15.28■□□□□ 0.04
ERCC3-202ENST00000426778 EGFRP00533 1210 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 ITIH2P19823 946 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 SYCP2LQ5T4T6 812 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 PCNX4Q63HM2 1172 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-202ENST00000426778 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms