RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 ELAVL2Q12926 359 aaKnown RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 ZRSR1Q15695 479 aaKnown RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 FOXD4L6Q3SYB3 417 aaPredicted RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 ZNF568Q3ZCX4 644 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 RTP2Q5QGT7 225 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 FAM171A1Q5VUB5 890 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 LILRA6Q6PI73 481 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 FOXD4L3Q6VB84 417 aaPredicted RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 SPATA31D4Q6ZUB0 917 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 CCDC149Q6ZUS6 474 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 ZSCAN30Q86W11 494 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 SYT2Q8N9I0 419 aaPredicted RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 HASPINQ8TF76 798 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 SPIRE2Q8WWL2 714 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 CDK5RAP3Q96JB5 506 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 AK8Q96MA6 479 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 UROC1Q96N76 676 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 PPP1R10Q96QC0 940 aaKnown RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 NTPCRQ9BSD7 190 aaKnown RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 TTPALQ9BTX7 342 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 CCDC94Q9BW85 323 aaPredicted RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 MRPL4Q9BYD3 311 aaKnown RBP8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 FGFBP2Q9BYJ0 223 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 HAPLN2Q9GZV7 340 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 NT5C3AQ9H0P0 336 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 CDT1Q9H211 546 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 PTPRHQ9HD43 1115 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 KCND2Q9NZV8 630 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 ARHGAP28Q9P2N2 729 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 LIMD1Q9UGP4 676 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 DOCK8Q8NF50 2099 aa8.98□□□□□ -0.97
TRIM43CP-201ENST00000422468 DOCK6Q96HP0 2047 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 SFI1A8K8P3 1242 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 TMEM189-UBE2V1I3L0A0 370 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 SLC16A4O15374 487 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 RFPL2O75678 378 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 BRD1O95696 1058 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 ASGR2P07307 311 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 MCF2P10911 925 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 PLS3P13797 630 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 RPL17P18621 184 aaKnown RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 PDCP20941 246 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 PROZP22891 400 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 SMTNP53814 917 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 YARSP54577 528 aaKnown RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 NHLH1Q02575 133 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 KARSQ15046 597 aaKnown RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 GLIPR1L2Q4G1C9 344 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 SCARA3Q6AZY7 606 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 PDXDC1Q6P996 788 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 DCLRE1AQ6PJP8 1040 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 SHC4Q6S5L8 630 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 PRSS55Q6UWB4 352 aaPredicted RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 ALKAL1Q6UXT8 129 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 BRAPQ7Z569 592 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 CEP57Q86XR8 500 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 GLYCTKQ8IVS8 523 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 LINC00301Q8NCQ3 95 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 LNX1Q8TBB1 728 aaPredicted RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 PIK3R5Q8WYR1 880 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 SMG7Q92540 1137 aaKnown RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 ZNF707Q96C28 371 aaPredicted RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 PRRX2Q99811 253 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 CLSTN3Q9BQT9 956 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 TARS2Q9BW92 718 aaKnown RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 WDR6Q9NNW5 1121 aaKnown RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 TOPORSQ9NS56 1045 aaPredicted RBP8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 ZDHHC7Q9NXF8 308 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 CLUHO75153 1309 aa8.97□□□□□ -0.97
TRIM43CP-201ENST00000422468 WDR87Q6ZQQ6 2873 aa8.96□□□□□ -0.97
TRIM43CP-201ENST00000422468 SMIM28A0A1B0GU29 152 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 TRAPPC3O43617 180 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 B3GAT3O94766 335 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 BMP15O95972 392 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 F13A1P00488 732 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 PLA2G4BP0C869 781 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 ZSCAN22P10073 491 aaPredicted RBP8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 MYBP10242 640 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 PLCG1P19174 1290 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 FGFR3P22607 806 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 UBA7P41226 1012 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 CLCNKBP51801 687 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 RAD51AP2Q09MP3 1159 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 STRN3Q13033 797 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 PSMD5Q16401 504 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 UPP1Q16831 310 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 XKR4Q5GH76 650 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 GLRA4Q5JXX5 417 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 MPZL3Q6UWV2 235 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 CEP120Q8N960 986 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 TMEM161BQ8NDZ6 487 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 GLIS3Q8NEA6 775 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 STAMQ92783 540 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 PDLIM2Q96JY6 352 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 NAP1L5Q96NT1 182 aaPredicted RBP8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 TCHPQ9BT92 498 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 PRKD2Q9BZL6 878 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 SMOC2Q9H3U7 446 aa8.96□□□□□ -0.98
TRIM43CP-201ENST00000422468 PIDD1Q9HB75 910 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms