RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TXNP10599 105 aaKnown RBP15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CETPP11597 493 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ACO1P21399 889 aaKnown RBP15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 COMTP21964 271 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PEX5P50542 639 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 DR1Q01658 176 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TNFAIP2Q03169 654 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TAP1Q03518 808 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PLCB4Q15147 1175 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 LY6KQ17RY6 165 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SGSM1Q2NKQ1 1148 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 DCAF12L1Q5VU92 463 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 LEKR1Q6ZMV7 388 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CROCCP2Q86T23 111 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PHF13Q86YI8 300 aaPredicted RBP15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GSPT2Q8IYD1 628 aaKnown RBP15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MCOLN2Q8IZK6 566 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 IQCKQ8N0W5 287 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GPRC5AQ8NFJ5 357 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 IFT81Q8WYA0 676 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SLCO2A1Q92959 643 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TATDN2Q93075 761 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SYT17Q9BSW7 474 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 DDX47Q9H0S4 455 aaKnown RBP15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FZD8Q9H461 694 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TXNRD2Q9NNW7 524 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CPSF3Q9UKF6 684 aaKnown RBP15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TELO2Q9Y4R8 837 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 RBM47A0AV96 593 aaKnown RBP15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GLTPD2A6NH11 291 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PSTPIP1O43586 416 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 VNN1O95497 513 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GNA15P30679 374 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PHKA2P46019 1235 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GTF2A2P52657 109 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ZNF132P52740 706 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 HSDL1Q3SXM5 330 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SYDE1Q6ZW31 735 aaPredicted RBP15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MON1BQ7L1V2 547 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 RNF149Q8NC42 400 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 AP1M1Q9BXS5 423 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NIF3L1Q9GZT8 377 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CWC15Q9P013 229 aaKnown RBP15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FEZ2Q9UHY8 353 aaPredicted RBP15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ANK1P16157 1881 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ZBTB42B2RXF5 422 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MYO1FO00160 1098 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ARIH2O95376 493 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GH1P01241 217 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 IVLP07476 585 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MAPK4P31152 587 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 EIF3BP55884 814 aaKnown RBP15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MESDQ14696 234 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TTC39CQ8N584 583 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PPTC7Q8NI37 304 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ALG3Q92685 438 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ERP44Q9BS26 406 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TCHPQ9BT92 498 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 HAPLN2Q9GZV7 340 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ZCCHC17Q9NP64 241 aaKnown RBP15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MORF4L1Q9UBU8 362 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 AMACRQ9UHK6 382 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TNFSF13BQ9Y275 285 aa15.54■□□□□ 0.08
HLA-DPA1-242ENST00000419277 HMGB1P1B2RPK0 211 aaPredicted RBP15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TNNC2P02585 160 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CALB1P05937 261 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TMOD1P28289 359 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NOMO3P69849 1222 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CDC42EP1Q00587 391 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ATF7IP2Q5U623 682 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 EMC10Q5UCC4 262 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ARMCX2Q7L311 632 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NT5DC4Q86YG4 428 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 UBR7Q8N806 425 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SLC10A4Q96EP9 437 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TSPYL1Q9H0U9 437 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PTPRHQ9HD43 1115 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CALCOCO1Q9P1Z2 691 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ANAPC7Q9UJX3 599 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CEP83Q9Y592 693 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 IVNS1ABPQ9Y6Y0 642 aa15.53■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ABLIM1O14639 778 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SORBS3O60504 671 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 HOXC6P09630 235 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ECHS1P30084 290 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CETN2P41208 172 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 RNASE9P60153 205 aaKnown RBP15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PCBP1Q15365 356 aaKnown RBP eCLIP15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MAMDC4Q6UXC1 1216 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 APBB1IPQ7Z5R6 666 aaPredicted RBP15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ANKRD23Q86SG2 305 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 DNAAF5Q86Y56 855 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SLC13A5Q86YT5 568 aaPredicted RBP15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FBXO16Q8IX29 292 aaPredicted RBP15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 RBBP8NLQ8NC74 664 aaPredicted RBP15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GRK7Q8WTQ7 553 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FMO2Q99518 471 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms