RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 DDX53Q86TM3 631 aaKnown RBP23.22■■□□□ 1.31
HMCES-203ENST00000417226 NELFBQ8WX92 580 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 MRPL38Q96DV4 380 aaKnown RBP23.22■■□□□ 1.31
HMCES-203ENST00000417226 EEF2KMTQ96G04 330 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 DDX27Q96GQ7 796 aaKnown RBP23.22■■□□□ 1.31
HMCES-203ENST00000417226 FAM84AQ96KN4 292 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 VN1R3Q9BXE9 311 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 TLR9Q9NR96 1032 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 TMEM63CQ9P1W3 806 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 ADAM28Q9UKQ2 775 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.22■■□□□ 1.31
HMCES-203ENST00000417226 MTCH2Q9Y6C9 303 aa23.22■■□□□ 1.31
HMCES-203ENST00000417226 COL6A3P12111 3177 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 TADA2AO75478 443 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 DLATP10515 647 aaKnown RBP23.21■■□□□ 1.31
HMCES-203ENST00000417226 CYP3A5P20815 502 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 IGFBP6P24592 240 aaPredicted RBP23.21■■□□□ 1.31
HMCES-203ENST00000417226 RPL9P32969 192 aaKnown RBP23.21■■□□□ 1.31
HMCES-203ENST00000417226 PAK1Q13153 545 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 PSMD6Q15008 389 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 LMBRD2Q68DH5 695 aaPredicted RBP23.21■■□□□ 1.31
HMCES-203ENST00000417226 RBM43Q6ZSC3 357 aaKnown RBP23.21■■□□□ 1.31
HMCES-203ENST00000417226 NT5DC4Q86YG4 428 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 MICALL1Q8N3F8 863 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 C3orf58Q8NDZ4 430 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 CCDC127Q96BQ5 260 aa23.21■■□□□ 1.31
HMCES-203ENST00000417226 SURF1Q15526 300 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 CAVIN1Q6NZI2 390 aaKnown RBP23.2■■□□□ 1.3
HMCES-203ENST00000417226 FUT10Q6P4F1 479 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 DCLRE1AQ6PJP8 1040 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 VPS52Q8N1B4 723 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 MFSD14AQ96MC6 490 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 FNBP1Q96RU3 617 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 ENTPD7Q9NQZ7 604 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 PTPRJQ12913 1337 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 SCN1AP35498 2009 aa23.2■■□□□ 1.3
HMCES-203ENST00000417226 PRUNE2Q8WUY3 3088 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 AKAP3O75969 853 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 LRPAP1P30533 357 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 IRS1P35568 1242 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 STX17P56962 302 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 ERVFC1P60507 584 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 DPCR1Q3MIW9 517 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 MLKLQ8NB16 471 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 CACTINQ8WUQ7 758 aaKnown RBP23.19■■□□□ 1.3
HMCES-203ENST00000417226 TCF25Q9BQ70 676 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 MTMR12Q9C0I1 747 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 DPP3Q9NY33 737 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 LMCD1Q9NZU5 365 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 PCDHGC5Q9Y5F6 944 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 SF3B1O75533 1304 aaKnown RBP eCLIP23.19■■□□□ 1.3
HMCES-203ENST00000417226 VWA8A3KMH1 1905 aa23.19■■□□□ 1.3
HMCES-203ENST00000417226 BICDL2A1A5D9 508 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 TMEM189-UBE2V1I3L0A0 370 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 CETN3O15182 167 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 TMEM191BP0C7N4 346 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 POU3F3P20264 500 aaPredicted RBP23.18■■□□□ 1.3
HMCES-203ENST00000417226 NLRP12P59046 1061 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 FKBP3Q00688 224 aaKnown RBP23.18■■□□□ 1.3
HMCES-203ENST00000417226 KLHL40Q2TBA0 621 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 PLPP4Q5VZY2 271 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 WDR49Q8IV35 697 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 FAM186BQ8IYM0 893 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 PLEKHO2Q8TD55 490 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 MICAL1Q8TDZ2 1067 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 SYAP1Q96A49 352 aaPredicted RBP23.18■■□□□ 1.3
HMCES-203ENST00000417226 POP1Q99575 1024 aaKnown RBP23.18■■□□□ 1.3
HMCES-203ENST00000417226 CGRRF1Q99675 332 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 GPR62Q9BZJ7 368 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 ZBP1Q9H171 429 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 STK39Q9UEW8 545 aa23.18■■□□□ 1.3
HMCES-203ENST00000417226 PPEF2O14830 753 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 TNNI1P19237 187 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 CA8P35219 290 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 PSMC2P35998 433 aaKnown RBP23.17■■□□□ 1.3
HMCES-203ENST00000417226 C9orf57Q5W0N0 161 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 TTI2Q6NXR4 508 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 CD300LGQ6UXG3 332 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 TMC7Q7Z402 723 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 OR5B17Q8NGF7 314 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 ANKRD36BP1Q96IX9 119 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 HERC2P3Q9BVR0 1158 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 GZF1Q9H116 711 aaPredicted RBP23.17■■□□□ 1.3
HMCES-203ENST00000417226 INTS13Q9NVM9 706 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 NUB1Q9Y5A7 615 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 I3L4J1 428 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 MAPK13O15264 365 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 EFEMP2O95967 443 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 SOD2P04179 222 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 TIGD5Q53EQ6 642 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 TAS1R1Q7RTX1 841 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 ZC3H3Q8IXZ2 948 aaKnown RBP23.17■■□□□ 1.3
HMCES-203ENST00000417226 RNF168Q8IYW5 571 aaPredicted RBP23.17■■□□□ 1.3
HMCES-203ENST00000417226 C1orf127Q8N9H9 656 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 AUTS2Q8WXX7 1259 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 B3GALT6Q96L58 329 aa23.17■■□□□ 1.3
HMCES-203ENST00000417226 DUSP9Q99956 384 aaKnown RBP23.17■■□□□ 1.3
HMCES-203ENST00000417226 FSCN2O14926 492 aa23.16■■□□□ 1.3
HMCES-203ENST00000417226 TNNC2P02585 160 aa23.16■■□□□ 1.3
HMCES-203ENST00000417226 ITGB3P05106 788 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms