RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 PRR29P0C7W0 189 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 CREMQ03060 361 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 ZBTB6Q15916 424 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 LEXMQ3ZCV2 418 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 CRELD2Q6UXH1 353 aaPredicted RBP19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 TAS1R1Q7RTX1 841 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 PPFIBP1Q86W92 1011 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 NELFCDQ8IXH7 590 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 SAAL1Q96ER3 474 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 TIGD1Q96MW7 591 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 TUBGCP4Q9UGJ1 667 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 C2CD2Q9Y426 696 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 C2CD2LO14523 706 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 LILRB3O75022 631 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 CLASP2O75122 1294 aaKnown RBP19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 RHOBTB3O94955 611 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 KIF20AO95235 890 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 LTBRP36941 435 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 SPAG1Q07617 926 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 STK4Q13043 487 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 KCNB1Q14721 858 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 TMEM132DQ14C87 1099 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 KNOP1Q1ED39 458 aaKnown RBP19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 PUS10Q3MIT2 529 aaKnown RBP19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 FAM171A1Q5VUB5 890 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 KIAA0319Q5VV43 1072 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 JADE1Q6IE81 842 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 PDXDC1Q6P996 788 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 TMEM184AQ6ZMB5 413 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 NT5DC4Q86YG4 428 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 GPD1LQ8N335 351 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 KIAA0895Q8NCT3 520 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 BEST2Q8NFU1 509 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 NECAB3Q96P71 396 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 TTPALQ9BTX7 342 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 KIAA1586Q9HCI6 787 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 AGPAT3Q9NRZ7 376 aa19.55■□□□□ 0.72
SEMA3B-201ENST00000416295 H3BQ06 376 aaPredicted RBP19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 TGFB1I1O43294 461 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 GLP2RO95838 553 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 CNPP09543 421 aaKnown RBP19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 LRPAP1P30533 357 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 KCNC3Q14003 757 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 SPATA1Q5VX52 437 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 BRSK2Q8IWQ3 736 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 C3orf58Q8NDZ4 430 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 VN1R2Q8NFZ6 395 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 GOLGA5Q8TBA6 731 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 RIN2Q8WYP3 895 aaPredicted RBP19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 CASP10Q92851 521 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 B3GALT6Q96L58 329 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 KLHL5Q96PQ7 755 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 PCIF1Q9H4Z3 704 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 RXFP1Q9HBX9 757 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 RBAKQ9NYW8 714 aaPredicted RBP19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 HSPBP1Q9NZL4 362 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 NUB1Q9Y5A7 615 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 HCFC2Q9Y5Z7 792 aa19.54■□□□□ 0.72
SEMA3B-201ENST00000416295 KINO60870 393 aaKnown RBP19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 ADH1AP07327 375 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 NFICP08651 508 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 KLRC2P26717 231 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 DLX2Q07687 328 aaPredicted RBP19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 LLGL2Q6P1M3 1020 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 CEP57Q86XR8 500 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 NOC3LQ8WTT2 800 aaKnown RBP19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 PIK3R5Q8WYR1 880 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 IPO9Q96P70 1041 aaKnown RBP19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 RMND1Q9NWS8 449 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 CLEC1BQ9P126 229 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 FNIP2Q9P278 1114 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 CD207Q9UJ71 328 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 BARX2Q9UMQ3 279 aaPredicted RBP19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 FAM50BQ9Y247 325 aa19.53■□□□□ 0.72
SEMA3B-201ENST00000416295 GOLGA8IPA6NC78 632 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 GOLGA8JA6NMD2 632 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 SMC2O95347 1197 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 FGFR3P22607 806 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 UBE2HP62256 183 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 PNOCQ13519 176 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 RTP2Q5QGT7 225 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 CD300LGQ6UXG3 332 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 C12orf56Q8IXR9 622 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 ZSWIM2Q8NEG5 633 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 MSLNLQ96KJ4 702 aa19.52■□□□□ 0.72
SEMA3B-201ENST00000416295 TRIP11Q15643 1979 aa19.52■□□□□ 0.71
SEMA3B-201ENST00000416295 ZNF233A6NK53 670 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 SYN3O14994 580 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 TEX28O15482 410 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 GADD45BO75293 160 aaPredicted RBP19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 HOXB8P17481 243 aaPredicted RBP19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 PAX3P23760 479 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 IGFBP6P24592 240 aaPredicted RBP19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 MCM4P33991 863 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 BRCC3P46736 316 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 RBM10P98175 930 aaKnown RBP19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 SURF1Q15526 300 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 PTCRAQ6ISU1 281 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms