RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 MXI1P50539 228 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 GYS2P54840 703 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 GUCY2DQ02846 1103 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 DMP1Q13316 513 aaPredicted RBP15.91■□□□□ 0.14
USP4-203ENST00000415188 TUBB8Q3ZCM7 444 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 FAM47CQ5HY64 1035 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 PHLDB3Q6NSJ2 640 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 DAAM2Q86T65 1068 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 METTL13Q8N6R0 699 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 FAM76AQ8TAV0 307 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 TMC2Q8TDI7 906 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 SCLYQ96I15 445 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 CBWD1Q9BRT8 395 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 EPB41L5Q9HCM4 733 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 CXXC1Q9P0U4 656 aaPredicted RBP15.91■□□□□ 0.14
USP4-203ENST00000415188 NOC2LQ9Y3T9 749 aaKnown RBP15.91■□□□□ 0.14
USP4-203ENST00000415188 PCDHA10Q9Y5I2 948 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 A0A0C4DFX4 3053 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 SCN10AQ9Y5Y9 1956 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 TMCO5BA8MYB1 307 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 CCNE2O96020 404 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 GLI1P08151 1106 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 NR3C2P08235 984 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 DNA2P51530 1060 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 PEX3P56589 373 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 ARHGAP1Q07960 439 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 PPP3CAQ08209 521 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 UGCGQ16739 394 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 C11orf63Q6NUN7 778 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 CD302Q8IX05 232 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 C1orf131Q8NDD1 294 aaKnown RBP15.91■□□□□ 0.14
USP4-203ENST00000415188 MCPH1Q8NEM0 835 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 KCNN1Q92952 543 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 VWCEQ96DN2 955 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 FAM81BQ96LP2 452 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 NTPCRQ9BSD7 190 aaKnown RBP15.91■□□□□ 0.14
USP4-203ENST00000415188 ISCUQ9H1K1 167 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 UBE2TQ9NPD8 197 aaPredicted RBP15.91■□□□□ 0.14
USP4-203ENST00000415188 TBX20Q9UMR3 447 aa15.91■□□□□ 0.14
USP4-203ENST00000415188 EYSQ5T1H1 3165 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 FOXN3O00409 490 aaPredicted RBP15.9■□□□□ 0.14
USP4-203ENST00000415188 SLC16A4O15374 487 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 RAD51CO43502 376 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 KPNA6O60684 536 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 GH1P01241 217 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 FGBP02675 491 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 PSAPP07602 524 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 MMP3P08254 477 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 GZMAP12544 262 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 ZSCAN26Q16670 478 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 ARHGAP44Q17R89 818 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 C1orf220Q5T0J3 134 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 FAM102BQ5T8I3 360 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 MAEAQ7L5Y9 396 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 OTOP2Q7RTS6 562 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 TMEM161BQ8NDZ6 487 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 CCDC26Q8TAB7 109 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 SLC35G2Q8TBE7 412 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 CASKIN2Q8WXE0 1202 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 HERVK_113Q902F9 699 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 TIFAQ96CG3 184 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 CARD9Q9H257 536 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 PCIF1Q9H4Z3 704 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 COQ4Q9Y3A0 265 aa15.9■□□□□ 0.14
USP4-203ENST00000415188 TMEM265A0A087WTH1 108 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 GOLGA6CA6NDK9 693 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 MIF4GDA9UHW6 222 aaKnown RBP15.89■□□□□ 0.13
USP4-203ENST00000415188 ATP9AO75110 1047 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 PHACTR2O75167 634 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 MTA2O94776 668 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 SUPT20HL2P0C7V6 817 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 GOLGA6DP0CG33 693 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 HSPA9P38646 679 aaKnown RBP15.89■□□□□ 0.13
USP4-203ENST00000415188 CARSP49589 748 aaKnown RBP15.89■□□□□ 0.13
USP4-203ENST00000415188 MFAP3P55082 362 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 GRIN2CQ14957 1233 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 MAATS1Q7Z4T9 603 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 RDH13Q8NBN7 331 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 FBXL18Q96ME1 805 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 GDAP1L1Q96MZ0 367 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 PBX4Q9BYU1 374 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 TMEM8AQ9HCN3 771 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 KMT5AQ9NQR1 393 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 GOLGA6AQ9NYA3 693 aa15.89■□□□□ 0.13
USP4-203ENST00000415188 KRIT1O00522 736 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 DLL1O00548 723 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 KIAA0391O15091 583 aaKnown RBP15.88■□□□□ 0.13
USP4-203ENST00000415188 SORBS3O60504 671 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 BUB1BO60566 1050 aaPredicted RBP15.88■□□□□ 0.13
USP4-203ENST00000415188 SHOX2O60902 331 aaPredicted RBP15.88■□□□□ 0.13
USP4-203ENST00000415188 RTN2O75298 545 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 DGAT1O75907 488 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 RGS20O76081 388 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 KCNA2P16389 499 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 GARTP22102 1010 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 NPTX2P47972 431 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 GCLMP48507 274 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 GPC3P51654 580 aa15.88■□□□□ 0.13
USP4-203ENST00000415188 DLG4P78352 724 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms