RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 GRM5P41594 1212 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 CCR2P41597 374 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 ADCY1Q08828 1119 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 ORC2Q13416 577 aaPredicted RBP13.37□□□□□ -0.27
LIMS2-210ENST00000413578 ZNF852Q6ZMS4 543 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 TCEAL8Q8IYN2 117 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 GPR161Q8N6U8 529 aaKnown RBP13.37□□□□□ -0.27
LIMS2-210ENST00000413578 ATRIPQ8WXE1 791 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 ZMAT2Q96NC0 199 aaKnown RBP13.37□□□□□ -0.27
LIMS2-210ENST00000413578 CDT1Q9H211 546 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 CACNA1BQ00975 2339 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 SYN3O14994 580 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
LIMS2-210ENST00000413578 MOSPD3O75425 235 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 SEC24AO95486 1093 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 PTPN2P17706 415 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 LIG1P18858 919 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 MTAPQ13126 283 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 FAM78AQ5JUQ0 283 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 TSSK4Q6SA08 328 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 TAS1R3Q7RTX0 852 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 DAW1Q8N136 415 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 KIFAP3Q92845 792 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 ACO2Q99798 780 aaKnown RBP13.36□□□□□ -0.27
LIMS2-210ENST00000413578 FAM126AQ9BYI3 521 aaPredicted RBP13.36□□□□□ -0.27
LIMS2-210ENST00000413578 CHRDQ9H2X0 955 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 POLD4Q9HCU8 107 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 TRPV5Q9NQA5 729 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 NCDNQ9UBB6 729 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 ZFHX4Q86UP3 3567 aa13.36□□□□□ -0.27
LIMS2-210ENST00000413578 PODXLO00592 558 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 NCAM2O15394 837 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 LRG1P02750 347 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 KCNE1P15382 129 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 PROZP22891 400 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 FOSBP53539 338 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
LIMS2-210ENST00000413578 EPHA5P54756 1037 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 MAP4K3Q8IVH8 894 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 C4orf32Q8N8J7 132 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 IFT74Q96LB3 600 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 ASB16Q96NS5 453 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 IER2Q9BTL4 223 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 BHMT2Q9H2M3 363 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 TRPV4Q9HBA0 871 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 PARD6AQ9NPB6 346 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 ARHGAP28Q9P2N2 729 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 FBXL5Q9UKA1 691 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 MRPS17Q9Y2R5 130 aaKnown RBP13.35□□□□□ -0.27
LIMS2-210ENST00000413578 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 NCANO14594 1321 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 PHLPP2Q6ZVD8 1323 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 MIA3Q5JRA6 1907 aa13.35□□□□□ -0.27
LIMS2-210ENST00000413578 COL4A2P08572 1712 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 PRR5-ARHGAP8B1AHC4 643 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 ARNTLO00327 626 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 MAN2B1O00754 1011 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 SDHBP21912 280 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 NPTX2P47972 431 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
LIMS2-210ENST00000413578 ARHGAP8P85298 464 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 MAPK7Q13164 816 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 TRIM29Q14134 588 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 GRM2Q14416 872 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 ZNF174Q15697 407 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 HAUS3Q68CZ6 603 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 SUSD3Q96L08 255 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 CCDC94Q9BW85 323 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-210ENST00000413578 TMEM134Q9H6X4 195 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 ZFP14Q9HCL3 533 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 TOPORSQ9NS56 1045 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-210ENST00000413578 SLC38A7Q9NVC3 462 aa13.34□□□□□ -0.27
LIMS2-210ENST00000413578 KMT2BQ9UMN6 2715 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-210ENST00000413578 H7C4K7 107 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 K7ERI5 159 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 ZNF197O14709 1029 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 YARSP54577 528 aaKnown RBP13.33□□□□□ -0.28
LIMS2-210ENST00000413578 LMNB2Q03252 620 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 ZNF568Q3ZCX4 644 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 VITQ6UXI7 678 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 PDZD4Q76G19 769 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-210ENST00000413578 APBB1IPQ7Z5R6 666 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-210ENST00000413578 IGSF22Q8N9C0 903 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 CNTNAP3BQ96NU0 1288 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
LIMS2-210ENST00000413578 TARS2Q9BW92 718 aaKnown RBP13.33□□□□□ -0.28
LIMS2-210ENST00000413578 CNTNAP3Q9BZ76 1288 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 FOXP1Q9H334 677 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-210ENST00000413578 BRD9Q9H8M2 597 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 ZNF334Q9HCZ1 680 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms