RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ZBTB6Q15916 424 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 UPP1Q16831 310 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 LMBRD2Q68DH5 695 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-202ENST00000412686 TMC7Q7Z402 723 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 DDX53Q86TM3 631 aaKnown RBP8.38□□□□□ -1.07
CPSF4-202ENST00000412686 BRSK2Q8IWQ3 736 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 SPATA20Q8TB22 786 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 GPT2Q8TD30 523 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 CCDC47Q96A33 483 aaKnown RBP8.38□□□□□ -1.07
CPSF4-202ENST00000412686 GBP4Q96PP9 640 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 HERC2P3Q9BVR0 1158 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 COLEC11Q9BWP8 271 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 PLEKHA5Q9HAU0 1116 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 PDE11AQ9HCR9 933 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 RBAKQ9NYW8 714 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-202ENST00000412686 PUF60Q9UHX1 559 aaKnown RBP8.38□□□□□ -1.07
CPSF4-202ENST00000412686 ADAM28Q9UKQ2 775 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 LZTS1Q9Y250 596 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 MYO7AQ13402 2215 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 PLXNA3P51805 1871 aa8.38□□□□□ -1.07
CPSF4-202ENST00000412686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 TRIM49BA6NDI0 452 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 C2orf71A6NGG8 1288 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 GLP2RO95838 553 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 NR3C1P04150 777 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 SOD2P04179 222 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 RPL17P18621 184 aaKnown RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 PRCPP42785 496 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 NRIP1P48552 1158 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 CASP4P49662 377 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 PMS1P54277 932 aaKnown RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 TFF2Q03403 129 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 DLX2Q07687 328 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 TMEM132DQ14C87 1099 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 PTPN14Q15678 1187 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 KYAT1Q16773 422 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 DUSP6Q16828 381 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 RTP2Q5QGT7 225 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 ZNF658Q5TYW1 1059 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 FAM171A1Q5VUB5 890 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 SPATA1Q5VX52 437 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 PRSS55Q6UWB4 352 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 EP400NLQ6ZTU2 488 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 VN1R2Q8NFZ6 395 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 FEZF2Q8TBJ5 459 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 PLEKHO2Q8TD55 490 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 EEF2KMTQ96G04 330 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 CCDC34Q96HJ3 373 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 FBXL18Q96ME1 805 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 GSDMAQ96QA5 445 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 MFRPQ9BY79 579 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 GZF1Q9H116 711 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 SLC38A7Q9NVC3 462 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 RMND1Q9NWS8 449 aa8.37□□□□□ -1.07
CPSF4-202ENST00000412686 UBQLN1Q9UMX0 589 aaKnown RBP8.37□□□□□ -1.07
CPSF4-202ENST00000412686 TSC2P49815 1807 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 SF3B1O75533 1304 aaKnown RBP eCLIP8.36□□□□□ -1.072e-6■■■■■ 59.4
CPSF4-202ENST00000412686 SCN1AP35498 2009 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 ZNF233A6NK53 670 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 TMEM189-UBE2V1I3L0A0 370 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 EXOC3O60645 756 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 LILRB3O75022 631 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 CLASP2O75122 1294 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 TBX10O75333 385 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 SMC2O95347 1197 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 CXCL14O95715 111 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 LDHAP00338 332 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 URODP06132 367 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 TKTP29401 623 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 LRPAP1P30533 357 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 MCM4P33991 863 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 LTBRP36941 435 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 GLUD2P49448 558 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 TFAMQ00059 246 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 CYP24A1Q07973 514 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 SMC1AQ14683 1233 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 SNRNP35Q16560 246 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 ZCWPW2Q504Y3 356 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 KIAA0319Q5VV43 1072 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 C9orf57Q5W0N0 161 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 LLGL2Q6P1M3 1020 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 DCLRE1AQ6PJP8 1040 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 CEP57Q86XR8 500 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 GLYCTKQ8IVS8 523 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 C12orf56Q8IXR9 622 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 ELOA2Q8IYF1 753 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 GUF1Q8N442 669 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 MRPL43Q8N983 215 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 XXYLT1Q8NBI6 393 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 OR5B17Q8NGF7 314 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 RIN2Q8WYP3 895 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 CCDC127Q96BQ5 260 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 UROC1Q96N76 676 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 POP1Q99575 1024 aaKnown RBP8.36□□□□□ -1.07
CPSF4-202ENST00000412686 MTMR12Q9C0I1 747 aa8.36□□□□□ -1.07
CPSF4-202ENST00000412686 CLSTN2Q9H4D0 955 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms