RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 THPOP40225 353 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 QARSP47897 775 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 HDAC4P56524 1084 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 GPC5P78333 572 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 TRIP4Q15650 581 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 FAM47EQ6ZV65 393 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 PNMA5Q96PV4 448 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 OSGEPL1Q9H4B0 414 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 POLR1AO95602 1720 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 NR3C1P04150 777 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 NFICP08651 508 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 TYK2P29597 1187 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 AMHR2Q16671 573 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 RPRD1BQ9NQG5 326 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 PARVAQ9NVD7 372 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 APRTP07741 180 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 LRRC63Q05C16 580 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 GFPT1Q06210 699 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 NEK9Q8TD19 979 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 TBC1D22BQ9NU19 505 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.521e-8■■■■□ 26.3
PRPF40A-202ENST00000410080 ATP11BQ9Y2G3 1177 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 CAB39Q9Y376 341 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 V9GYQ6 96 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 GRAP2O75791 330 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 LMBRD2Q68DH5 695 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 SLC7A14Q8TBB6 771 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 ELAC2Q9BQ52 826 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 KDM1AO60341 852 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 CEP78Q5JTW2 689 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 NOL9Q5SY16 702 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 BEND6Q5SZJ8 279 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 SLC44A2Q8IWA5 706 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 THAP9Q9H5L6 903 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 UTP6Q9NYH9 597 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 PYCARDQ9ULZ3 195 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 POTECB2RU33 542 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 GOLGA8RI6L899 631 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 DNAJB2P25686 324 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 GNASQ5JWF2 1037 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 PODXLO00592 558 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 ASAP2O43150 1006 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 KRT20P35900 424 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 BCAR1P56945 870 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 NNTQ13423 1086 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 CLEC4FQ8N1N0 589 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 TMEM245Q9H330 911 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 RERGLQ9H628 205 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 KCNQ2O43526 872 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 TBC1D4O60343 1298 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 AP2B1P63010 937 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 TSC22D1Q15714 1073 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 SHCBP1Q8NEM2 672 aa11.8□□□□□ -0.52
PRPF40A-202ENST00000410080 ANKMY2Q8IV38 441 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 RHOT2Q8IXI1 618 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 KRT84Q9NSB2 600 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 IPPQ9Y573 584 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 SLC30A1Q9Y6M5 507 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 FYNP06241 537 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 IL10P22301 178 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 FCGRTP55899 365 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 SESN2P58004 480 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 TDRD10Q5VZ19 366 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 NDST4Q9H3R1 872 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 IL1RL2Q9HB29 575 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 PRG3Q9Y2Y8 225 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 RPS6KA4O75676 772 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 PCDH8O95206 1070 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 EIF3EP60228 445 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 PDIA2Q13087 525 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 CYP4A22Q5TCH4 519 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 DEFB128Q7Z7B8 93 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 ZBED8Q8IZ13 594 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 PTPRN2Q92932 1015 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 TADA1Q96BN2 335 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 MAGED4Q96JG8 741 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 ARHGEF38Q9NXL2 777 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 CROCC2H7BZ55 1655 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 SFNP31947 248 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 KYAT1Q16773 422 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 PLD3Q8IV08 490 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms