RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 HSP90AA4PQ58FG1 418 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 MIIPQ5JXC2 388 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 KRT39Q6A163 491 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 TRAPPC11Q7Z392 1133 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 ZNF280BQ86YH2 543 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 RNF214Q8ND24 703 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 ANKRD20A12PQ8NF67 263 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 DDX27Q96GQ7 796 aaKnown RBP16.45■□□□□ 0.22
LSM5-207ENST00000410044 UROC1Q96N76 676 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 YME1L1Q96TA2 773 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 PCDHA11Q9Y5I1 949 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 PIRO00625 290 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 TLL1O43897 1013 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 TNNC2P02585 160 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 AFPP02771 609 aaKnown RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 TMEM191BP0C7N4 346 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 FMO5P49326 533 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 COPB1P53618 953 aaKnown RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 BTG3Q14201 252 aaPredicted RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 UVSSAQ2YD98 709 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 DCAF17Q5H9S7 520 aaPredicted RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 TCERG1LQ5VWI1 586 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 FAM117BQ6P1L5 589 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 CREBRFQ8IUR6 639 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 C1orf127Q8N9H9 656 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 CLP1Q92989 425 aaKnown RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 C18orf25Q96B23 403 aaPredicted RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 FAM193BQ96PV7 902 aaPredicted RBP16.44■□□□□ 0.22
LSM5-207ENST00000410044 NDST4Q9H3R1 872 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 ITGA11Q9UKX5 1188 aa16.44■□□□□ 0.22
LSM5-207ENST00000410044 GTPBP10A4D1E9 387 aaKnown RBP16.43■□□□□ 0.22
LSM5-207ENST00000410044 B4GALT3O60512 393 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
LSM5-207ENST00000410044 ALDH2P05091 517 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 LINC00271P0C7V0 271 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 PAX3P23760 479 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 GCLMP48507 274 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 RNASELQ05823 741 aaKnown RBP16.43■□□□□ 0.22
LSM5-207ENST00000410044 UPP1Q16831 310 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 CBWD6Q4V339 395 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 CBWD3Q5JTY5 395 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 CBWD5Q5RIA9 395 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 TDRD10Q5VZ19 366 aaKnown RBP16.43■□□□□ 0.22
LSM5-207ENST00000410044 LMBRD2Q68DH5 695 aaPredicted RBP16.43■□□□□ 0.22
LSM5-207ENST00000410044 DCLRE1AQ6PJP8 1040 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 FIBCD1Q8N539 461 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 MTMR12Q9C0I1 747 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 TUBGCP4Q9UGJ1 667 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 SIX4Q9UIU6 781 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 GBF1Q92538 1859 aa16.43■□□□□ 0.22
LSM5-207ENST00000410044 SCN1AP35498 2009 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 TMEM189-UBE2V1I3L0A0 370 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 VNN1O95497 513 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 STAU1O95793 577 aaKnown RBP16.42■□□□□ 0.22
LSM5-207ENST00000410044 GALTP07902 379 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 MXI1P50539 228 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 RBP5P82980 135 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 PAN2Q504Q3 1202 aaKnown RBP16.42■□□□□ 0.22
LSM5-207ENST00000410044 C9orf57Q5W0N0 161 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 FAM109BQ6ICB4 259 aaPredicted RBP16.42■□□□□ 0.22
LSM5-207ENST00000410044 LRRC52Q8N7C0 313 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 VRTNQ9H8Y1 702 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
LSM5-207ENST00000410044 TAB2Q9NYJ8 693 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 DNAJB4Q9UDY4 337 aa16.42■□□□□ 0.22
LSM5-207ENST00000410044 MRPL42Q9Y6G3 142 aaKnown RBP16.42■□□□□ 0.22
LSM5-207ENST00000410044 A0A1B0GTH6 734 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 GRXCR1A8MXD5 290 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 NRP1O14786 923 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 ITGB3P05106 788 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 TPM2P07951 284 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 LAG3P18627 525 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 ATICP31939 592 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 CLCNKBP51801 687 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 RABGGTBP53611 331 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 FANCCQ00597 558 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 EPC2Q52LR7 807 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 SCARA3Q6AZY7 606 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 CD300LGQ6UXG3 332 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 FBXL13Q8NEE6 735 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 LMO3Q8TAP4 145 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 FAM84AQ96KN4 292 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 PAAF1Q9BRP4 392 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 COLEC11Q9BWP8 271 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 VPS16Q9H269 839 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 GOLGA2P5Q9HBQ8 144 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
LSM5-207ENST00000410044 LCHNA4D1U4 455 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 CASTOR2A6NHX0 329 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 LGALS16A8MUM7 142 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 PODXLO00592 558 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 EFEMP2O95967 443 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 HLA-DRAP01903 254 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 PNPLA4P41247 253 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 SLC11A1P49279 550 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 ALDH7A1P49419 539 aaKnown RBP16.4■□□□□ 0.22
LSM5-207ENST00000410044 GUCY2FP51841 1108 aa16.4■□□□□ 0.22
LSM5-207ENST00000410044 BCAR1P56945 870 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms