RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 POLR2BP30876 1174 aaKnown RBP13.58□□□□□ -0.24
PMS1-204ENST00000409823 FXR1P51114 621 aaKnown RBP eCLIP13.58□□□□□ -0.24
PMS1-204ENST00000409823 MYL6P60660 151 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
PMS1-204ENST00000409823 HSP90AA2PQ14568 343 aaPredicted RBP13.58□□□□□ -0.24
PMS1-204ENST00000409823 SURF1Q15526 300 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 EPC2Q52LR7 807 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 CNKSR3Q6P9H4 555 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 LMO3Q8TAP4 145 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 PAAF1Q9BRP4 392 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 HCSTQ9UBK5 93 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 AJAP1Q9UKB5 411 aaPredicted RBP13.58□□□□□ -0.24
PMS1-204ENST00000409823 LRFN2Q9ULH4 789 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 CITO14578 2027 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 A0A1W2PQC6 194 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 PNMA6AP0CW24 399 aaPredicted RBP13.57□□□□□ -0.24
PMS1-204ENST00000409823 GTF2H1P32780 548 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 DEKP35659 375 aaKnown RBP13.57□□□□□ -0.24
PMS1-204ENST00000409823 DEFB103AP81534 67 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 TRPC3Q13507 836 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 CCDC186Q7Z3E2 898 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 KAT5Q92993 513 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 TATDN2Q93075 761 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 PGBD4Q96DM1 585 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 C2CD2Q9Y426 696 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 ZBBXA8MT70 800 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 OFD1O75665 1012 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 PTMAP06454 111 aaKnown RBP13.57□□□□□ -0.24
PMS1-204ENST00000409823 FAM189BP81408 668 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 RAPGEF1Q13905 1077 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 ZNF365Q70YC5 407 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 ARHGEF19Q8IW93 802 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 PPM1KQ8N3J5 372 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 PDLIM2Q96JY6 352 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 ARID3AQ99856 593 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 SIX2Q9NPC8 291 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 AGAP1Q9UPQ3 857 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 FHOD1Q9Y613 1164 aa13.57□□□□□ -0.24
PMS1-204ENST00000409823 N4BP1O75113 896 aaKnown RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 THP07101 528 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 SKIP12755 728 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 CDC25BP30305 580 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 RFC2P35250 354 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 FPGSQ05932 587 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 PAN2Q504Q3 1202 aaKnown RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 GLB1LQ6UWU2 654 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 CACTINQ8WUQ7 758 aaKnown RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 C1orf112Q9NSG2 853 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 TMEM161AQ9NX61 479 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 ANK1P16157 1881 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 EOMESO95936 686 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 UCHL3P15374 230 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 MCCD1P59942 119 aaPredicted RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 ARHGAP44Q17R89 818 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 XKR4Q5GH76 650 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 KLHDC7AQ5VTJ3 777 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 DPY19L2P1Q6NXN4 242 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 PPFIBP1Q86W92 1011 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 CD302Q8IX05 232 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 ABI1Q8IZP0 508 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 ZNF830Q96NB3 372 aaPredicted RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 PPP1R10Q96QC0 940 aaKnown RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 APOBEC3GQ9HC16 384 aaKnown RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 UBE2TQ9NPD8 197 aaPredicted RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 IL23AQ9NPF7 189 aa13.56□□□□□ -0.24
PMS1-204ENST00000409823 CXXC1Q9P0U4 656 aaPredicted RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 NXF1Q9UBU9 619 aaKnown RBP13.56□□□□□ -0.24
PMS1-204ENST00000409823 GTPBP10A4D1E9 387 aaKnown RBP13.55□□□□□ -0.24
PMS1-204ENST00000409823 F8W810 466 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 B4GALT3O60512 393 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 KCNE1P15382 129 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 SCARA5Q6ZMJ2 495 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 CACNA2D4Q7Z3S7 1137 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 ZNF280BQ86YH2 543 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 HASPINQ8TF76 798 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 APEX2Q9UBZ4 518 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 COQ4Q9Y3A0 265 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 R3HCC1Q9Y3T6 440 aaKnown RBP13.55□□□□□ -0.24
PMS1-204ENST00000409823 NUB1Q9Y5A7 615 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 EYSQ5T1H1 3165 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 CLCNKBP51801 687 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 ARID5AQ03989 594 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 RNASELQ05823 741 aaKnown RBP13.55□□□□□ -0.24
PMS1-204ENST00000409823 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 IQCEQ6IPM2 695 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 BEST2Q8NFU1 509 aa13.55□□□□□ -0.24
PMS1-204ENST00000409823 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.55□□□□□ -0.242e-8■□□□□ 9.3
PMS1-204ENST00000409823 UBQLN1Q9UMX0 589 aaKnown RBP13.55□□□□□ -0.24
PMS1-204ENST00000409823 P4HA2O15460 535 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 PBX3P40426 434 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms