RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZNF233A6NK53 670 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 HIDE1A8MVS5 230 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 PER2O15055 1255 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 MEFVO15553 781 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-205ENST00000409810 CALUO43852 315 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-205ENST00000409810 EFEMP2O95967 443 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 ADH1AP07327 375 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 PAX3P23760 479 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 LRPAP1P30533 357 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 HOXD13P35453 343 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 NDUFV1P49821 464 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 MRPS5P82675 430 aaKnown RBP11.83□□□□□ -0.52
CHMP3-205ENST00000409810 SOX4Q06945 474 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-205ENST00000409810 SPAG1Q07617 926 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 PNOCQ13519 176 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 FAM171A1Q5VUB5 890 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 JADE1Q6IE81 842 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 ELMSAN1Q6PJG2 1045 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-205ENST00000409810 C12orf56Q8IXR9 622 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 CACTINQ8WUQ7 758 aaKnown RBP11.83□□□□□ -0.52
CHMP3-205ENST00000409810 RABGGTAQ92696 567 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 CASP10Q92851 521 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 SMARCE1Q969G3 411 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 C18orf25Q96B23 403 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-205ENST00000409810 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 TTPALQ9BTX7 342 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 GPR62Q9BZJ7 368 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 IKZF4Q9H2S9 585 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 PCIF1Q9H4Z3 704 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 PRDM6Q9NQX0 595 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 CACNG4Q9UBN1 327 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 TUBGCP4Q9UGJ1 667 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
CHMP3-205ENST00000409810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 GOLGA8IPA6NC78 632 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 GOLGA8JA6NMD2 632 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 F8W810 466 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 GOLGA6L22H0YM25 854 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 C2CD2LO14523 706 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 SYN3O14994 580 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 GADD45BO75293 160 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 NFICP08651 508 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 KCNA5P22460 613 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 MCM4P33991 863 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 ZBTB6Q15916 424 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 CTC1Q2NKJ3 1217 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 CRELD2Q6UXH1 353 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 CEP57Q86XR8 500 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 XXYLT1Q8NBI6 393 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 AUTS2Q8WXX7 1259 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 RIN2Q8WYP3 895 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-205ENST00000409810 CHST7Q9NS84 486 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 XIRP2A4UGR9 3374 aa11.82□□□□□ -0.52
CHMP3-205ENST00000409810 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
CHMP3-205ENST00000409810 PLXNA3P51805 1871 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 PDXKO00764 312 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 CLIC2O15247 247 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 EXOC3O60645 756 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 CLASP2O75122 1294 aaKnown RBP11.81□□□□□ -0.52
CHMP3-205ENST00000409810 KLRC2P26717 231 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 CYP2J2P51589 502 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 ADAM15Q13444 863 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
CHMP3-205ENST00000409810 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 ZNF658Q5TYW1 1059 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-205ENST00000409810 KIAA0319Q5VV43 1072 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 TMEM184AQ6ZMB5 413 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 GUF1Q8N442 669 aaKnown RBP11.81□□□□□ -0.52
CHMP3-205ENST00000409810 C3orf58Q8NDZ4 430 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 APPL2Q8NEU8 664 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 PIK3R5Q8WYR1 880 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 ANKRD36BP1Q96IX9 119 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 FBXL18Q96ME1 805 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 ZNF560Q96MR9 790 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 KLHL5Q96PQ7 755 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 RXFP1Q9HBX9 757 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 DZANK1Q9NVP4 752 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 FNIP2Q9P278 1114 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 DPP7Q9UHL4 492 aa11.81□□□□□ -0.52
CHMP3-205ENST00000409810 R3HCC1Q9Y3T6 440 aaKnown RBP11.81□□□□□ -0.52
CHMP3-205ENST00000409810 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 LILRB3O75022 631 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 TBX10O75333 385 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 GLUD1P00367 558 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 C1RP00736 705 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 CNPP09543 421 aaKnown RBP11.8□□□□□ -0.52
CHMP3-205ENST00000409810 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 HOXB8P17481 243 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-205ENST00000409810 FGFR3P22607 806 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 RPL13P26373 211 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms