RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 TNNC2P02585 160 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 TRIM49P0CI25 452 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 TRIM49CP0CI26 452 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 EEF1GP26641 437 aaKnown RBP17.97■□□□□ 0.47
SUMO1-208ENST00000409627 GTF2H1P32780 548 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
SUMO1-208ENST00000409627 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
SUMO1-208ENST00000409627 LMBRD2Q68DH5 695 aaPredicted RBP17.97■□□□□ 0.47
SUMO1-208ENST00000409627 OR5B17Q8NGF7 314 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 ZNF516Q92618 1163 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 SLC35C1Q96A29 364 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 DDX27Q96GQ7 796 aaKnown RBP17.97■□□□□ 0.47
SUMO1-208ENST00000409627 HSD3B7Q9H2F3 369 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 GOLGA2P5Q9HBQ8 144 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 AAASQ9NRG9 546 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 DPP3Q9NY33 737 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 ITGA11Q9UKX5 1188 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 CASTOR2A6NHX0 329 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 KCNJ18B7U540 433 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 GALTP07902 379 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 ZNF18P17022 549 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 DNAJB2P25686 324 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 RPL9P32969 192 aaKnown RBP17.96■□□□□ 0.47
SUMO1-208ENST00000409627 SLC11A1P49279 550 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 GUCY2FP51841 1108 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 BCAR1P56945 870 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 KCNJ12Q14500 433 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 UPP1Q16831 310 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 TCP11X2Q5H9J9 407 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 TCERG1LQ5VWI1 586 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 KCNT2Q6UVM3 1135 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 C1orf127Q8N9H9 656 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 COLGALT1Q8NBJ5 622 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 ZNF558Q96NG5 402 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 NKX2-4Q9H2Z4 354 aa17.96■□□□□ 0.47
SUMO1-208ENST00000409627 ANO9A1A5B4 782 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 TMEM189-UBE2V1I3L0A0 370 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 PODXLO00592 558 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 NRP1O14786 923 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 ARHGEF15O94989 841 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 C4BPAP04003 597 aaKnown RBP17.95■□□□□ 0.46
SUMO1-208ENST00000409627 ALDH2P05091 517 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 MTIF2P46199 727 aaKnown RBP17.95■□□□□ 0.46
SUMO1-208ENST00000409627 OR1G1P47890 313 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 ALDH7A1P49419 539 aaKnown RBP17.95■□□□□ 0.46
SUMO1-208ENST00000409627 CLCNKBP51801 687 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 TAP1Q03518 808 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 PPP3CAQ08209 521 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 ZACNQ401N2 412 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 HSP90AA4PQ58FG1 418 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 C9orf57Q5W0N0 161 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 C15orf39Q6ZRI6 1047 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 TRAPPC11Q7Z392 1133 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 LUZP1Q86V48 1076 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 CXorf38Q8TB03 319 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 FAM84AQ96KN4 292 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 PAAF1Q9BRP4 392 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 TMEM8AQ9HCN3 771 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 FAN1Q9Y2M0 1017 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 PCDHB12Q9Y5F1 795 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.95■□□□□ 0.46
SUMO1-208ENST00000409627 PLXNA4Q9HCM2 1894 aa17.95■□□□□ 0.46
SUMO1-208ENST00000409627 SCN1AP35498 2009 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 PIRO00625 290 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 ITGB3P05106 788 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 PPM1AP35813 382 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 BMPR1AP36894 532 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 GCLMP48507 274 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 ERVK-21P61565 698 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 TPM4P67936 248 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 MAN2A1Q16706 1144 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 TDRD10Q5VZ19 366 aaKnown RBP17.94■□□□□ 0.46
SUMO1-208ENST00000409627 PPP2R2DQ66LE6 453 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 KRT39Q6A163 491 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 SV2AQ7L0J3 742 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 SLC39A11Q8N1S5 342 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 TIFAQ96CG3 184 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 TGS1Q96RS0 853 aaKnown RBP17.94■□□□□ 0.46
SUMO1-208ENST00000409627 TUBGCP2Q9BSJ2 902 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 COLEC11Q9BWP8 271 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 PLVAPQ9BX97 442 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 SLC28A3Q9HAS3 691 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 MARCH5Q9NX47 278 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 CACNG4Q9UBN1 327 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 SIX4Q9UIU6 781 aa17.94■□□□□ 0.46
SUMO1-208ENST00000409627 PRG3Q9Y2Y8 225 aaPredicted RBP17.94■□□□□ 0.46
SUMO1-208ENST00000409627 C5orf67F2Z3F1 127 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 GOLGA6L19H0YKK7 550 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 PMM2O15305 246 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 N4BP1O75113 896 aaKnown RBP17.93■□□□□ 0.46
SUMO1-208ENST00000409627 KIF4AO95239 1232 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 AFPP02771 609 aaKnown RBP17.93■□□□□ 0.46
SUMO1-208ENST00000409627 POLR2BP30876 1174 aaKnown RBP17.93■□□□□ 0.46
SUMO1-208ENST00000409627 CTNNB1P35222 781 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 PBX3P40426 434 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 MXI1P50539 228 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 RBP5P82980 135 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 KCNH2Q12809 1159 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms