RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CDCA3Q99618 268 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 MRPL17Q9NRX2 175 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 CHST7Q9NS84 486 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 MAPK8IP1Q9UQF2 711 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 LILRB3O75022 631 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 URODP06132 367 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 IGFBP6P24592 240 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 LRPAP1P30533 357 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 GLUD2P49448 558 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 CYP2J2P51589 502 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 DSG1Q02413 1049 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 ZNF658Q5TYW1 1059 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 KIAA1841Q6NSI8 718 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 NT5DC4Q86YG4 428 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 CBWD2Q8IUF1 395 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 GPR65Q8IYL9 337 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 C3orf58Q8NDZ4 430 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 BEST2Q8NFU1 509 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 AUTS2Q8WXX7 1259 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 HLA-CQ95604 372 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 LMBRD1Q9NUN5 540 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 COG5Q9UP83 839 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 SSX2IPQ9Y2D8 614 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 XIRP2A4UGR9 3374 aa21.52■■□□□ 1.04
PDLIM2-207ENST00000409417 ATG2AQ2TAZ0 1938 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 FSD2A1L4K1 749 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 PER2O15055 1255 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 TRAPPC3O43617 180 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 GTF2F1P35269 517 aaKnown RBP eCLIP21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 SNRNP35Q16560 246 aaKnown RBP21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 DUSP6Q16828 381 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 CTC1Q2NKJ3 1217 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 KIAA0319Q5VV43 1072 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 SLC9A9Q8IVB4 645 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 EFHBQ8N7U6 833 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 PABPC5Q96DU9 382 aaKnown RBP21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 IGFLR1Q9H665 355 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 PRDM6Q9NQX0 595 aa21.52■■□□□ 1.03
PDLIM2-207ENST00000409417 CA8P35219 290 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 WNT7BP56706 349 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 COBLL1Q53SF7 1204 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 FAM171A1Q5VUB5 890 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 EFCAB13Q8IY85 973 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 SMYD4Q8IYR2 804 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 B3GALT6Q96L58 329 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 TTPALQ9BTX7 342 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 PDE11AQ9HCR9 933 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 DMAC2Q9NW81 257 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 TRAF3IP3Q9Y228 551 aa21.51■■□□□ 1.03
PDLIM2-207ENST00000409417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 GOLGA6L22H0YM25 854 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 C2CD2LO14523 706 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 CALUO43852 315 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 EXOC3O60645 756 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 GUCY2FP51841 1108 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 ADAM15Q13444 863 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 MYBPC2Q14324 1141 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 SURF1Q15526 300 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 NUB1Q9Y5A7 615 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 A0A0C4DFX4 3053 aa21.5■■□□□ 1.03
PDLIM2-207ENST00000409417 UNC80Q8N2C7 3258 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 PDCD11Q14690 1871 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 NR3C1P04150 777 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 FGFR3P22607 806 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 TFAMQ00059 246 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 TMEM130Q8N3G9 435 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 RDH13Q8NBN7 331 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 CACTINQ8WUQ7 758 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 RIN2Q8WYP3 895 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 EMILIN2Q9BXX0 1053 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 UBE2ZQ9H832 354 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 RXFP1Q9HBX9 757 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 DPP3Q9NY33 737 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 CLDND1Q9NY35 253 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 THEGQ9P2T0 379 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 MAN1B1Q9UKM7 699 aa21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 SPTBN5Q9NRC6 3674 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-207ENST00000409417 TULP1O00294 542 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 CLASP2O75122 1294 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 CNPP09543 421 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 PRCPP42785 496 aa21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 BRCC3P46736 316 aa21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 CAMK4Q16566 473 aa21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 NFIL3Q16649 462 aa21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 RTP2Q5QGT7 225 aa21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 C9orf57Q5W0N0 161 aa21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 CEP57Q86XR8 500 aa21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.48■■□□□ 1.03
PDLIM2-207ENST00000409417 ANO9A1A5B4 782 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 PIRO00625 290 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 LTBRP36941 435 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 CREMQ03060 361 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 CYP24A1Q07973 514 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 KCNC3Q14003 757 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 ZCWPW2Q504Y3 356 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 PDXDC1Q6P996 788 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 PIK3R5Q8WYR1 880 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 SUSD3Q96L08 255 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms