RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 KIAA1841Q6NSI8 718 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 KIAA0895Q8NCT3 520 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 ZSWIM2Q8NEG5 633 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.87■□□□□ 0.93
RTN4-207ENST00000402434 FAM213AQ9BRX8 229 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 RXFP1Q9HBX9 757 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 TUBGCP4Q9UGJ1 667 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 HCFC2Q9Y5Z7 792 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 C2CD2LO14523 706 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 EXTL3O43909 919 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 RHOBTB3O94955 611 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 CA8P35219 290 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 NDUFV1P49821 464 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 KNOP1Q1ED39 458 aaKnown RBP20.86■□□□□ 0.93
RTN4-207ENST00000402434 FAM171A1Q5VUB5 890 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 SPATA1Q5VX52 437 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 ARMCX5Q6P1M9 558 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 SAAL1Q96ER3 474 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 B3GALT6Q96L58 329 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 TIGD1Q96MW7 591 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 KLHL5Q96PQ7 755 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 EMILIN2Q9BXX0 1053 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 AGPAT3Q9NRZ7 376 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 C2CD2Q9Y426 696 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 TTC28Q96AY4 2481 aa20.86■□□□□ 0.93
RTN4-207ENST00000402434 XPOTO43592 962 aaKnown RBP20.85■□□□□ 0.93
RTN4-207ENST00000402434 TRAPPC3O43617 180 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 NFICP08651 508 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 KCNB1Q14721 858 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 RTP2Q5QGT7 225 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 JADE1Q6IE81 842 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 BRSK2Q8IWQ3 736 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 NELFCDQ8IXH7 590 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 SLC22A17Q8WUG5 538 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 FAM212AQ96EL1 285 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 TTPALQ9BTX7 342 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 PCIF1Q9H4Z3 704 aa20.85■□□□□ 0.93
RTN4-207ENST00000402434 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.85■□□□□ 0.931e-9■■□□□ 13.3
RTN4-207ENST00000402434 CGNQ9P2M7 1197 aaKnown RBP20.85■□□□□ 0.93
RTN4-207ENST00000402434 BARX2Q9UMQ3 279 aaPredicted RBP20.85■□□□□ 0.93
RTN4-207ENST00000402434 ANK1P16157 1881 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 NCOR1O75376 2440 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 TEX28O15482 410 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 IL18RAPO95256 599 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 FGFR3P22607 806 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 TMEM132DQ14C87 1099 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 PUS10Q3MIT2 529 aaKnown RBP20.84■□□□□ 0.93
RTN4-207ENST00000402434 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.84■□□□□ 0.93
RTN4-207ENST00000402434 HS2ST1Q7LGA3 356 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 PPFIBP1Q86W92 1011 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 GPD1LQ8N335 351 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 RIN2Q8WYP3 895 aaPredicted RBP20.84■□□□□ 0.93
RTN4-207ENST00000402434 PIK3R5Q8WYR1 880 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 FBXL18Q96ME1 805 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 HSPBP1Q9NZL4 362 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 FNIP2Q9P278 1114 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 VCANP13611 3396 aa20.84■□□□□ 0.93
RTN4-207ENST00000402434 GOLGA8IPA6NC78 632 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 GOLGA8JA6NMD2 632 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 GADD45BO75293 160 aaPredicted RBP20.83■□□□□ 0.93
RTN4-207ENST00000402434 SRGAP2BP0DMP2 458 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 KLRC2P26717 231 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 NT5DC4Q86YG4 428 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 C12orf56Q8IXR9 622 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 ELOA2Q8IYF1 753 aaPredicted RBP20.83■□□□□ 0.93
RTN4-207ENST00000402434 SMRP1Q8NCR6 262 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 BEST2Q8NFU1 509 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 LNX1Q8TBB1 728 aaPredicted RBP20.83■□□□□ 0.93
RTN4-207ENST00000402434 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.93
RTN4-207ENST00000402434 KIAA1586Q9HCI6 787 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 CD207Q9UJ71 328 aa20.83■□□□□ 0.93
RTN4-207ENST00000402434 GRXCR2A6NFK2 248 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 C1RP00736 705 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 BRCC3P46736 316 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 CLCN4P51793 760 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 WNT7BP56706 349 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 CREMQ03060 361 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 PTCRAQ6ISU1 281 aaPredicted RBP20.82■□□□□ 0.92
RTN4-207ENST00000402434 ANKRD54Q6NXT1 300 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 LLGL2Q6P1M3 1020 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 CEP57Q86XR8 500 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 TMEM130Q8N3G9 435 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 TMEM174Q8WUU8 243 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 CASP10Q92851 521 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 SUSD3Q96L08 255 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 RBAKQ9NYW8 714 aaPredicted RBP20.82■□□□□ 0.92
RTN4-207ENST00000402434 VWA8A3KMH1 1905 aa20.82■□□□□ 0.92
RTN4-207ENST00000402434 ANO9A1A5B4 782 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 ADH1AP07327 375 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 HOXB8P17481 243 aaPredicted RBP20.81■□□□□ 0.92
RTN4-207ENST00000402434 GUCY2FP51841 1108 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 PNOCQ13519 176 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 PDXDC1Q6P996 788 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 SYCE2Q6PIF2 218 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 PRSS55Q6UWB4 352 aaPredicted RBP20.81■□□□□ 0.92
RTN4-207ENST00000402434 CLEC17AQ6ZS10 378 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 EFCAB13Q8IY85 973 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 SPATA20Q8TB22 786 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 GOLGA5Q8TBA6 731 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 IPO9Q96P70 1041 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms