RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PATL1Q86TB9 770 aaKnown RBP14.48□□□□□ -0.09
VAPA-202ENST00000400000 ELMO3Q96BJ8 720 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 TMEM60Q9H2L4 133 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 KIAA1586Q9HCI6 787 aa14.48□□□□□ -0.09
VAPA-202ENST00000400000 HMGB1P1B2RPK0 211 aaPredicted RBP14.47□□□□□ -0.09
VAPA-202ENST00000400000 MMS22LQ6ZRQ5 1243 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 TADA2BQ86TJ2 420 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 TBC1D16Q8TBP0 767 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 XPO7Q9UIA9 1087 aaKnown RBP14.47□□□□□ -0.09
VAPA-202ENST00000400000 SHANK2Q9UPX8 1470 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 NDUFS3O75489 264 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 SIX5Q8N196 739 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 RAB42Q8N4Z0 105 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 C10orf53Q8N6V4 93 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 CYGBQ8WWM9 190 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 CDC42BPGQ6DT37 1551 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 TTC26A0AVF1 554 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 ITGA4P13612 1032 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 SFNP31947 248 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 GOLGA7BQ2TAP0 167 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 C2CD6Q53TS8 623 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 ITPRIPL1Q6GPH6 555 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 CLEC4GQ6UXB4 293 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 LRRC37BQ96QE4 947 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 SERPINI2O75830 405 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 IMPDH2P12268 514 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 HSD17B4P51659 736 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 C4orf33Q8N1A6 199 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 RAB6BQ9NRW1 208 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 BFARQ9NZS9 450 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 TFR2Q9UP52 801 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 EEF2KO00418 725 aaKnown RBP14.47□□□□□ -0.09
VAPA-202ENST00000400000 NME5P56597 212 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 CHMP1BQ7LBR1 199 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 CHSY1Q86X52 802 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 CDKL3Q8IVW4 592 aaPredicted RBP14.47□□□□□ -0.09
VAPA-202ENST00000400000 TTC13Q8NBP0 860 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 ZNF280CQ8ND82 737 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 AGPAT1Q99943 283 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 C17orf80Q9BSJ5 609 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 IGFLR1Q9H665 355 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 C20orf96Q9NUD7 363 aaPredicted RBP14.47□□□□□ -0.09
VAPA-202ENST00000400000 LSM7Q9UK45 103 aaKnown RBP14.47□□□□□ -0.09
VAPA-202ENST00000400000 ZNRF3Q9ULT6 936 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 ADGBQ8N7X0 1667 aa14.47□□□□□ -0.09
VAPA-202ENST00000400000 FKBP9O95302 570 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 ALFQ53S48 1182 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 BTNL9Q6UXG8 535 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 FKBP9P1Q75LS8 142 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 RHOT1Q8IXI2 618 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 PPP1R13LQ8WUF5 828 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 JADE3Q92613 823 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 CPB2Q96IY4 423 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 TUBB6Q9BUF5 446 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 KDM4CQ9H3R0 1056 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 TRIM45Q9H8W5 580 aaPredicted RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 DONSONQ9NYP3 566 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 ZFATQ9P243 1243 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 GTF2A1LQ9UNN4 478 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 ITIH6Q6UXX5 1313 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 KRT7P08729 469 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 TAL1P17542 331 aaPredicted RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 USP10Q14694 798 aaKnown RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 NUDT18Q6ZVK8 323 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 MAGED4Q96JG8 741 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 TASP1Q9H6P5 420 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■□□□□ 10.6
VAPA-202ENST00000400000 NFKBIL1Q9UBC1 381 aaPredicted RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 PDGFRAP16234 1089 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 OCA2Q04671 838 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 COG1Q8WTW3 980 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 EIF2AQ9BY44 585 aaKnown RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 ZCCHC17Q9NP64 241 aaKnown RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 ZC4H2Q9NQZ6 224 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 ATP11BQ9Y2G3 1177 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 EIF3BP55884 814 aaKnown RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 WASHC5Q12768 1159 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 FAXCQ5TGI0 409 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 PTRHD1Q6GMV3 140 aaKnown RBP14.46□□□□□ -0.09
VAPA-202ENST00000400000 GALNT4Q8N4A0 578 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 PTPRN2Q92932 1015 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 ARHGEF38Q9NXL2 777 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 NAGPAQ9UK23 515 aa14.46□□□□□ -0.09
VAPA-202ENST00000400000 NEO1Q92859 1461 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 COG2Q14746 738 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 ZNF614Q8N883 585 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 SLC35G2Q8TBE7 412 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 GOLPH3Q9H4A6 298 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 TCP11X1B4DZS4 312 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.1
VAPA-202ENST00000400000 NCAM1P13591 858 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 ACTR2P61160 394 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 GUCY1A3Q02108 690 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 BRD8Q9H0E9 1235 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 RRAGCQ9HB90 399 aa14.46□□□□□ -0.1
VAPA-202ENST00000400000 METTL5Q9NRN9 209 aaKnown RBP14.46□□□□□ -0.1
VAPA-202ENST00000400000 ZNF70Q9UC06 446 aaPredicted RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms