RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 VPS11Q9H270 941 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 Q9H521 79 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 JMJD4Q9H9V9 463 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 NPHS2Q9NP85 383 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 DONSONQ9NYP3 566 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 MORC2Q9Y6X9 1032 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 UBA6A0AVT1 1052 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 A8MXQ7 604 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 DCTN3O75935 186 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TTC4O95801 387 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ARL4CP56559 192 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 RPS6P62753 249 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 PDIA2Q13087 525 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 MAP7Q14244 749 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TMEM132DQ14C87 1099 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 C2CD6Q53TS8 623 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 CYP4A22Q5TCH4 519 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ZBED8Q8IZ13 594 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 LRRC71Q8N4P6 559 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 SYT2Q8N9I0 419 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 URGCPQ8TCY9 931 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ZKSCAN4Q969J2 545 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 LMCD1Q9NZU5 365 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 DIS3Q9Y2L1 958 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 STRCQ7RTU9 1775 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ATP8B3O60423 1300 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 EIF4E1BA6NMX2 242 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 APOEP02649 317 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 CD44P16070 742 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 NLRP11P59045 1033 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 COPS2P61201 443 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 VPS72Q15906 364 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ENOSF1Q7L5Y1 443 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TXNRD3Q86VQ6 643 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 DNAAF5Q86Y56 855 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ZNF507Q8TCN5 953 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 COG1Q8WTW3 980 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 SNF8Q96H20 258 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 MAP3K14Q99558 947 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ZCWPW1Q9H0M4 648 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 CYP4F11Q9HBI6 524 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 GTSE1Q9NYZ3 720 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 XPO7Q9UIA9 1087 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 FBXL5Q9UKA1 691 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ARFGEF3Q5TH69 2177 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 E2F8A0AVK6 867 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PPP1R3GB7ZBB8 358 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 E5RI56 91 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 UPP2O95045 317 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 RPA1P27694 616 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 BCAR1P56945 870 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TSPY1Q01534 308 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PRKCEQ02156 737 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TNFAIP2Q03169 654 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 YWHAHQ04917 246 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 TAF1BQ53T94 588 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 TMED8Q6PL24 325 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 SLC47A2Q86VL8 602 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 CDR2LQ86X02 465 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 WDR75Q8IWA0 830 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 SPDYE1Q8NFV5 336 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 ELMO3Q96BJ8 720 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 FAM167AQ96KS9 214 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TARS2Q9BW92 718 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 INTS2Q9H0H0 1204 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 KCNH7Q9NS40 1196 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PRKAG2Q9UGJ0 569 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 FHOD1Q9Y613 1164 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 A0A087WUV0 522 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 ARHGEF37A1IGU5 675 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 MIF4GDA9UHW6 222 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 PPP1R12AO14974 1030 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 PON1P27169 355 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PRAMEP78395 509 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 NFIAQ12857 509 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PIGHQ14442 188 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 CAPRIN1Q14444 709 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 RAD9BQ6WBX8 426 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 NOA1Q8NC60 698 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 CXorf38Q8TB03 319 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 GANCQ8TET4 914 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.44□□□□□ -1.86
KNL1-202ENST00000399668 CCDC138Q96M89 665 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 GCOM2Q9BZD3 368 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 ANLNQ9NQW6 1124 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 RBM12Q9NTZ6 932 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 GGA3Q9NZ52 723 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ADA2Q9NZK5 511 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 FBXO40Q9UH90 709 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PPP1R9AQ9ULJ8 1098 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 SPATA31A5Q5VU36 1347 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 SPATA31A7Q8IWB4 1347 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PITPNM2Q9BZ72 1349 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 H3BRJ5 948 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 STK25O00506 426 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 APOL1O14791 398 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TADA2AO75478 443 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CSDE1O75534 798 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 GGPS1O95749 300 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CARSP49589 748 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms