RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 B3GAT3O94766 335 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 RBM10P98175 930 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 POU5F1Q01860 360 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 TMEM132DQ14C87 1099 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 DCLRE1AQ6PJP8 1040 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 TMC7Q7Z402 723 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 SLC9A9Q8IVB4 645 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 OR5B17Q8NGF7 314 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 CXorf38Q8TB03 319 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 MICAL1Q8TDZ2 1067 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 PUF60Q9UHX1 559 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 KIAA0391O15091 583 aaKnown RBP17.1■□□□□ 0.33
MBD1-207ENST00000398488 EXOC3O60645 756 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 IL18RAPO95256 599 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 CXCL14O95715 111 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 LRPAP1P30533 357 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 CYP24A1Q07973 514 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 HYAL1Q12794 435 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 ANKRD40Q6AI12 368 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 CENPPQ6IPU0 288 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 RBM23Q86U06 439 aaKnown RBP17.1■□□□□ 0.33
MBD1-207ENST00000398488 CD302Q8IX05 232 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 TMEM174Q8WUU8 243 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 ZNF516Q92618 1163 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 MFSD14AQ96MC6 490 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 NSUN3Q9H649 340 aaKnown RBP17.1■□□□□ 0.33
MBD1-207ENST00000398488 ENTPD7Q9NQZ7 604 aa17.1■□□□□ 0.33
MBD1-207ENST00000398488 CGNQ9P2M7 1197 aaKnown RBP17.1■□□□□ 0.33
MBD1-207ENST00000398488 SPTBN5Q9NRC6 3674 aaKnown RBP17.09■□□□□ 0.33
MBD1-207ENST00000398488 C2orf71A6NGG8 1288 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 TMEM189-UBE2V1I3L0A0 370 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 C2CD2LO14523 706 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 SPTLC1O15269 473 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 LINC01565O15544 149 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 SOD2P04179 222 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 CTSAP10619 480 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 CYP3A5P20815 502 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 PTPN14Q15678 1187 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 RTP2Q5QGT7 225 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 KIAA0319Q5VV43 1072 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 C9orf57Q5W0N0 161 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 MRPL43Q8N983 215 aaKnown RBP17.09■□□□□ 0.33
MBD1-207ENST00000398488 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 GOLGA5Q8TBA6 731 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 UROC1Q96N76 676 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 MED15Q96RN5 788 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 NUP62CLQ9H1M0 184 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 DPP3Q9NY33 737 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 DERAQ9Y315 318 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 VWA8A3KMH1 1905 aa17.09■□□□□ 0.33
MBD1-207ENST00000398488 ANO9A1A5B4 782 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 GOLGA6L22H0YM25 854 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 CALUO43852 315 aaPredicted RBP17.08■□□□□ 0.32
MBD1-207ENST00000398488 AKAP3O75969 853 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 NR2F2P24468 414 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 RPL9P32969 192 aaKnown RBP17.08■□□□□ 0.32
MBD1-207ENST00000398488 DLG4P78352 724 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 TFAMQ00059 246 aaKnown RBP17.08■□□□□ 0.32
MBD1-207ENST00000398488 PSMD6Q15008 389 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 NFIL3Q16649 462 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 TIGD5Q53EQ6 642 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 C1orf220Q5T0J3 134 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 BEST2Q8NFU1 509 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 VN1R2Q8NFZ6 395 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 CCDC127Q96BQ5 260 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
MBD1-207ENST00000398488 IGFLR1Q9H665 355 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 KIAA1586Q9HCI6 787 aa17.08■□□□□ 0.32
MBD1-207ENST00000398488 PIRO00625 290 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 KIF20AO95235 890 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 NRIP1P48552 1158 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 FAM171A1Q5VUB5 890 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 CEP135Q66GS9 1140 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
MBD1-207ENST00000398488 DUSP9Q99956 384 aaKnown RBP17.07■□□□□ 0.32
MBD1-207ENST00000398488 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 INTS13Q9NVM9 706 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 SIX4Q9UIU6 781 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 SCN1AP35498 2009 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 XIRP2A4UGR9 3374 aa17.07■□□□□ 0.32
MBD1-207ENST00000398488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 CARNS1A5YM72 827 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 DLATP10515 647 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 RPL17P18621 184 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 FGFR3P22607 806 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 TKTP29401 623 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 STX17P56962 302 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 DSG1Q02413 1049 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 ADAM9Q13443 819 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 MYBPC2Q14324 1141 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 RSPO2Q6UXX9 243 aaPredicted RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 ZC3H3Q8IXZ2 948 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 BORCS6Q96GS4 357 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms