RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 PCDHB12Q9Y5F1 795 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 GSTA1P08263 222 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 GSTA2P09210 222 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 GTF2H1P32780 548 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 CCL23P55773 120 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 MYLK4Q86YV6 388 aaPredicted RBP16.32■□□□□ 0.2
LSS-202ENST00000397728 FAM114A2Q9NRY5 505 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 LCMT1Q9UIC8 334 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 CYB561D2O14569 222 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 MAPRE1Q15691 268 aaKnown RBP16.31■□□□□ 0.2
LSS-202ENST00000397728 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 PDIK1LQ8N165 341 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 TTC13Q8NBP0 860 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
LSS-202ENST00000397728 RAD51Q06609 339 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 ORC1Q13415 861 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 CTXN3Q4LDR2 81 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 RHOT1Q8IXI2 618 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 EPAS1Q99814 870 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 PLEKHA5Q9HAU0 1116 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 RIPK3Q9Y572 518 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 H3BRJ5 948 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 MCUQ8NE86 351 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 CCHCR1Q8TD31 782 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 DHX38Q92620 1227 aaKnown RBP16.31■□□□□ 0.2
LSS-202ENST00000397728 POP1Q99575 1024 aaKnown RBP16.31■□□□□ 0.2
LSS-202ENST00000397728 DDX50Q9BQ39 737 aaKnown RBP16.31■□□□□ 0.2
LSS-202ENST00000397728 AGPAT5Q9NUQ2 364 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 SH3BP1Q9Y3L3 701 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 F5H423 210 aaPredicted RBP16.31■□□□□ 0.2
LSS-202ENST00000397728 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
LSS-202ENST00000397728 RFFLQ8WZ73 363 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 FAF2Q96CS3 445 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 WDR35Q9P2L0 1181 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 TRPV2Q9Y5S1 764 aa16.31■□□□□ 0.2
LSS-202ENST00000397728 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
LSS-202ENST00000397728 RTN2O75298 545 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
LSS-202ENST00000397728 HSD17B4P51659 736 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 DR1Q01658 176 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 AFAP1L1Q8TED9 768 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 PDGFCQ9NRA1 345 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 DNAJC17Q9NVM6 304 aaKnown RBP16.3■□□□□ 0.2
LSS-202ENST00000397728 SNCAIPQ9Y6H5 919 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 PPP1R3GB7ZBB8 358 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 BRD2P25440 801 aaKnown RBP16.3■□□□□ 0.2
LSS-202ENST00000397728 STX2P32856 288 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 IFT43Q96FT9 208 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 ATP8A1Q9Y2Q0 1164 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 NRCAMQ92823 1304 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 A0A1B0GTH6 734 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 P4HA2O15460 535 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 HMGCRP04035 888 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 HOXC6P09630 235 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 ADAM2Q99965 735 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 KLC2Q9H0B6 622 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
LSS-202ENST00000397728 PIK3CDO00329 1044 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 TAP1Q03518 808 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 SLC27A1Q6PCB7 646 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
LSS-202ENST00000397728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.3■□□□□ 0.21e-10■■□□□ 11.9
LSS-202ENST00000397728 TPI1P60174 286 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 AP1B1Q10567 949 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 BRD3Q15059 726 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 DCAF6Q58WW2 860 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
LSS-202ENST00000397728 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 DCLK2Q8N568 766 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 RABEP2Q9H5N1 569 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 PPME1Q9Y570 386 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 H7C4K7 107 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 ATP9AO75110 1047 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 ITGB5P18084 799 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 RAB27AP51159 221 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 C10orf120Q5SQS8 335 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
LSS-202ENST00000397728 SCFD1Q8WVM8 642 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 DFFAO00273 331 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 ADCY1Q08828 1119 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 ST3GAL1Q11201 340 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 LRP6O75581 1613 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 GMNNO75496 209 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 AP1G2O75843 785 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 ZNF235Q14590 738 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 CYP4A22Q5TCH4 519 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 PNMA5Q96PV4 448 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 KANSL3Q9P2N6 904 aa16.29■□□□□ 0.2
LSS-202ENST00000397728 PACSIN2Q9UNF0 486 aaPredicted RBP16.29■□□□□ 0.2
LSS-202ENST00000397728 MRPS25P82663 173 aaKnown RBP16.28■□□□□ 0.2
LSS-202ENST00000397728 CUL2Q13617 745 aa16.28■□□□□ 0.2
LSS-202ENST00000397728 IKBKEQ14164 716 aa16.28■□□□□ 0.2
LSS-202ENST00000397728 PGBD3Q8N328 593 aa16.28■□□□□ 0.2
LSS-202ENST00000397728 ASIC4Q96FT7 647 aa16.28■□□□□ 0.2
LSS-202ENST00000397728 ABCF3Q9NUQ8 709 aa16.28■□□□□ 0.2
LSS-202ENST00000397728 TIMM13Q9Y5L4 95 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms