RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 BEST2Q8NFU1 509 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 KIAA1586Q9HCI6 787 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 C2CD2Q9Y426 696 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 C2orf71A6NGG8 1288 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 ZNF233A6NK53 670 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 PDXKO00764 312 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 CXCL14O95715 111 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 CYP3A5P20815 502 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 GTF2F1P35269 517 aaKnown RBP eCLIP22.98■■□□□ 1.275e-7■■■■■ 34.9
TSPAN4-206ENST00000397408 GLUD2P49448 558 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 PTPN14Q15678 1187 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 SPATA1Q5VX52 437 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 EFCAB13Q8IY85 973 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 MRPL43Q8N983 215 aaKnown RBP22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 B3GALT6Q96L58 329 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 FBXL18Q96ME1 805 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 IGFLR1Q9H665 355 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 TLE6Q9H808 572 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 PRDM6Q9NQX0 595 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 MAN1B1Q9UKM7 699 aa22.98■■□□□ 1.27
TSPAN4-206ENST00000397408 C2CD2LO14523 706 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 PER2O15055 1255 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 LRPAP1P30533 357 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 SNRNP35Q16560 246 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 CAMK4Q16566 473 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 KIAA1841Q6NSI8 718 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 CD300LGQ6UXG3 332 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 RDH13Q8NBN7 331 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 PDE11AQ9HCR9 933 aa22.97■■□□□ 1.27
TSPAN4-206ENST00000397408 CALUO43852 315 aaPredicted RBP22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 EXOC3O60645 756 aa22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 NR3C1P04150 777 aa22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 ELAVL2Q12926 359 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 USP41Q3LFD5 358 aa22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 ISM2Q6H9L7 571 aa22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 GTPBP4Q9BZE4 634 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 MRPL17Q9NRX2 175 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 TRAF3IP3Q9Y228 551 aa22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 NUB1Q9Y5A7 615 aa22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 IRAK3Q9Y616 596 aa22.96■■□□□ 1.27
TSPAN4-206ENST00000397408 PRCPP42785 496 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 BRCC3P46736 316 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 TFAMQ00059 246 aaKnown RBP22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 DSG1Q02413 1049 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 DUSP6Q16828 381 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 FAM171A1Q5VUB5 890 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 EP400NLQ6ZTU2 488 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 NT5DC4Q86YG4 428 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 SLC9A9Q8IVB4 645 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 CHST7Q9NS84 486 aa22.95■■□□□ 1.26
TSPAN4-206ENST00000397408 I3L4J1 428 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 BIN1O00499 593 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 PPEF2O14830 753 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 MCM4P33991 863 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 COBLL1Q53SF7 1204 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 RTP2Q5QGT7 225 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 CEP57Q86XR8 500 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 FAM84AQ96KN4 292 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 CDCA3Q99618 268 aaPredicted RBP22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 CLSTN2Q9H4D0 955 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 DMAC2Q9NW81 257 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 DPP3Q9NY33 737 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 CLDND1Q9NY35 253 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 SSX2IPQ9Y2D8 614 aa22.94■■□□□ 1.26
TSPAN4-206ENST00000397408 VWA8A3KMH1 1905 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 LINC01565O15544 149 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 TRAPPC3O43617 180 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 NCK2O43639 380 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 CYP24A1Q07973 514 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 COL19A1Q14993 1142 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 SURF1Q15526 300 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 ZCWPW2Q504Y3 356 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 KIAA0319Q5VV43 1072 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 LMBRD2Q68DH5 695 aaPredicted RBP22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 EFHBQ8N7U6 833 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 RIN2Q8WYP3 895 aaPredicted RBP22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 HLA-CQ95604 372 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 PABPC5Q96DU9 382 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 TTPALQ9BTX7 342 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 UBE2ZQ9H832 354 aaPredicted RBP22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 THEGQ9P2T0 379 aa22.93■■□□□ 1.26
TSPAN4-206ENST00000397408 LILRB3O75022 631 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 NR2F2P24468 414 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 MORC3Q14149 939 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 MYBPC2Q14324 1141 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 C9orf57Q5W0N0 161 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 CACTINQ8WUQ7 758 aaKnown RBP22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 TMEM174Q8WUU8 243 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 EMILIN2Q9BXX0 1053 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 MTMR12Q9C0I1 747 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 KIAA1468Q9P260 1216 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 COG5Q9UP83 839 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 PTPRJQ12913 1337 aa22.92■■□□□ 1.26
TSPAN4-206ENST00000397408 FSD2A1L4K1 749 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 CLASP2O75122 1294 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 CNPP09543 421 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 TMEM191BP0C7N4 346 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 DLATP10515 647 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 BMP6P22004 513 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms