RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SPATA31C1P0DKV0 1188 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 FDPSP14324 419 aaKnown RBP9.66□□□□□ -0.86
CAPN3-208ENST00000397204 ATP2B1P20020 1258 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 MAGEA9P43362 315 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 RBM25P49756 843 aaKnown RBP9.66□□□□□ -0.86
CAPN3-208ENST00000397204 MMP16P51512 607 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 PFKPQ01813 784 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 PRPF4BQ13523 1007 aaKnown RBP9.66□□□□□ -0.86
CAPN3-208ENST00000397204 SNW1Q13573 536 aaKnown RBP9.66□□□□□ -0.86
CAPN3-208ENST00000397204 PUM1Q14671 1186 aaKnown RBP eCLIP9.66□□□□□ -0.86
CAPN3-208ENST00000397204 NAB2Q15742 525 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 MAPK6Q16659 721 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 AXDND1Q5T1B0 1012 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-208ENST00000397204 CDCA2Q69YH5 1023 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-208ENST00000397204 FGF13Q92913 245 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 RMDN1Q96DB5 314 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 ADPGKQ9BRR6 497 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 BCO2Q9BYV7 579 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 TUFT1Q9NNX1 390 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 SNTG2Q9NY99 539 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 FBXO4Q9UKT5 387 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 DOCK8Q8NF50 2099 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 FAM170BA6NMN3 283 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 BTBD18B2RXH4 712 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 CCL16O15467 120 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 TRAPPC3O43617 180 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 USO1O60763 962 aaKnown RBP9.65□□□□□ -0.86
CAPN3-208ENST00000397204 KINO60870 393 aaKnown RBP9.65□□□□□ -0.86
CAPN3-208ENST00000397204 DXOO77932 396 aaKnown RBP9.65□□□□□ -0.86
CAPN3-208ENST00000397204 KIF4AO95239 1232 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 GLULP15104 373 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 CYP11B2P19099 503 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 FGFR3P22607 806 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 OR1D2P34982 312 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 EFNA5P52803 228 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 ANAPC15P60006 121 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 NTHL1P78549 312 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-208ENST00000397204 MAEAQ7L5Y9 396 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 DGLUCYQ7Z3D6 616 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 RETREG3Q86VR2 466 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 CATSPER3Q86XQ3 398 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 KIAA2013Q8IYS2 634 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 MAML2Q8IZL2 1156 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-208ENST00000397204 SUMF1Q8NBK3 374 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 POLR3CQ9BUI4 534 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-208ENST00000397204 FOXQ1Q9C009 403 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 PDZD7Q9H5P4 517 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 GPRC5CQ9NQ84 441 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 POLIQ9UNA4 740 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 BACE2Q9Y5Z0 518 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 F5P12259 2224 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 ACACBO00763 2458 aa9.65□□□□□ -0.86
CAPN3-208ENST00000397204 C2orf16Q68DN1 1984 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 TMEM189-UBE2V1I3L0A0 370 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 SPTLC1O15269 473 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 NCAM2O15394 837 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 ADAM12O43184 909 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 LAMTOR5O43504 91 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 RECQL4O94761 1208 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 PRKCBP05771 671 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 SDHBP21912 280 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 MUTP22033 750 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 RPA1P27694 616 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 NAMPTP43490 491 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 TRIM29Q14134 588 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 PPP2R5AQ15172 486 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 MLF2Q15773 248 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 DCAF4L1Q3SXM0 396 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 PABPC1LQ4VXU2 614 aaKnown RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 ZBTB41Q5SVQ8 909 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 ANKS3Q6ZW76 656 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 APBB1IPQ7Z5R6 666 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 NOSTRINQ8IVI9 506 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 DIS3L2Q8IYB7 885 aaKnown RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 ST13P5Q8NFI4 369 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 ITFG1Q8TB96 612 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 SLC7A14Q8TBB6 771 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 HASPINQ8TF76 798 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 ATRIPQ8WXE1 791 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 CLDN23Q96B33 292 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 UROC1Q96N76 676 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 HINFPQ9BQA5 517 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 KDM4CQ9H3R0 1056 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 AVENQ9NQS1 362 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 SPATA6Q9NWH7 488 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 DLL3Q9NYJ7 618 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 GDE1Q9NZC3 331 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 DNMT3BQ9UBC3 853 aaKnown RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 CACNG4Q9UBN1 327 aa9.64□□□□□ -0.87
CAPN3-208ENST00000397204 MRPS23Q9Y3D9 190 aaKnown RBP9.64□□□□□ -0.87
CAPN3-208ENST00000397204 MTCL1Q9Y4B5 1905 aaKnown RBP9.63□□□□□ -0.87
CAPN3-208ENST00000397204 ARHGEF35A5YM69 484 aa9.63□□□□□ -0.87
CAPN3-208ENST00000397204 DTNBO60941 627 aa9.63□□□□□ -0.87
CAPN3-208ENST00000397204 LRRN2O75325 713 aa9.63□□□□□ -0.87
CAPN3-208ENST00000397204 MED24O75448 989 aa9.63□□□□□ -0.87
CAPN3-208ENST00000397204 ECI2O75521 394 aa9.63□□□□□ -0.87
CAPN3-208ENST00000397204 B3GAT3O94766 335 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms