RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 RIN2Q8WYP3 895 aaPredicted RBP18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 RBM12Q9NTZ6 932 aaKnown RBP18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 PCDHGC5Q9Y5F6 944 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 CYP26A1O43174 497 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 VNN1O95497 513 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 SYF2O95926 243 aaKnown RBP18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 IGHA2P01877 340 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 IQCF3P0C7M6 154 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 EEF1DP3Q658K8 133 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 RPUSD2Q8IZ73 545 aaKnown RBP18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 KIAA0319LQ8IZA0 1049 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 OR5B17Q8NGF7 314 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 OLIG1Q8TAK6 271 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 LMBR1Q8WVP7 490 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 LENG1Q96BZ8 264 aaPredicted RBP18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 FAM84AQ96KN4 292 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 IMPG2Q9BZV3 1241 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 CDT1Q9H211 546 aa18.42■□□□□ 0.54
SCNN1A-205ENST00000396966 A0A0A6YYK5 440 aaPredicted RBP18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 CLSTN1O94985 981 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 SGPL1O95470 568 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 MYL3P08590 195 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 AKR1A1P14550 325 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 CTGFP29279 349 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 PSMC4P43686 418 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 NOP2P46087 812 aaKnown RBP18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 PDE6CP51160 858 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 DUOXA2Q1HG44 320 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 CFAP221Q4G0U5 840 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 CYP4F22Q6NT55 531 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 EPS8L1Q8TE68 723 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 SLC20A1Q8WUM9 679 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 KAT2BQ92831 832 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 KATNAL1Q9BW62 490 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 PSD3Q9NYI0 1048 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 TRIP12Q14669 1992 aaPredicted RBP18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 TMCO5BA8MYB1 307 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 RNF40O75150 1001 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 ERLIN2O94905 339 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 MCF2P10911 925 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 AARSP49588 968 aaKnown RBP eCLIP18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 PSEN2P49810 448 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 GALCP54803 685 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 AMHR2Q16671 573 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 CDR2LQ86X02 465 aaPredicted RBP18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 RPF1Q9H9Y2 349 aaKnown RBP18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 CITO14578 2027 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 CASP8AP2Q9UKL3 1982 aa18.41■□□□□ 0.54
SCNN1A-205ENST00000396966 GRID2IPA4D2P6 1211 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 IL18RAPO95256 599 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 TMEM253P0C7T8 217 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 KRT5P13647 590 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 GGCXP38435 758 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 RNASE9P60153 205 aaKnown RBP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 OSTNP61366 133 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 NCOA4Q13772 614 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 KYAT1Q16773 422 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 AENQ8WTP8 325 aaKnown RBP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 CTNNBL1Q8WYA6 563 aaPredicted RBP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 FAM204AQ9H8W3 233 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 SMIM35A0A1B0GVV1 85 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 CSDE1O75534 798 aaKnown RBP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 TBXAS1P24557 533 aaPredicted RBP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 NOGQ13253 232 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 MFSD14CQ5VZR4 134 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 SND1Q7KZF4 910 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 NOP9Q86U38 636 aaKnown RBP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 SLC47A2Q86VL8 602 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 ELMO3Q96BJ8 720 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 CALCOCO1Q9P1Z2 691 aa18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 NOCTQ9UK39 431 aaKnown RBP18.4■□□□□ 0.54
SCNN1A-205ENST00000396966 HAS3O00219 553 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 TNNC2P02585 160 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 TMEM191BP0C7N4 346 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 CYP11B1P15538 503 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 ARF4P18085 180 aaPredicted RBP18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 LACTBP83111 547 aaPredicted RBP18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 MEI1Q5TIA1 1274 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 C8orf74Q6P047 294 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 DHX38Q92620 1227 aaKnown RBP18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 ANKRD36BP1Q96IX9 119 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 MTMR12Q9C0I1 747 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 PLEKHA4Q9H4M7 779 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 PDZD7Q9H5P4 517 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 STIM2Q9P246 746 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 ANKRD62A6NC57 917 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 B4GALT4O60513 344 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 CYP2C9P11712 490 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 CAPN2P17655 700 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 BPIFB4P59827 614 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 NOP14P78316 857 aaKnown RBP18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 BEX3Q00994 111 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 POU5F1Q01860 360 aaKnown RBP18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 CUL2Q13617 745 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 FSCN1Q16658 493 aaKnown RBP18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 TAF3Q5VWG9 929 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 SPOPLQ6IQ16 392 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 CEP120Q8N960 986 aa18.39■□□□□ 0.53
SCNN1A-205ENST00000396966 CPB2Q96IY4 423 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms