RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 COMTP21964 271 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 PHKA2P46019 1235 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 PTENP60484 403 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 MBTD1Q05BQ5 628 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 GJC2Q5T442 439 aaPredicted RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 RBBP8NLQ8NC74 664 aaPredicted RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 CASKIN2Q8WXE0 1202 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 ALG3Q92685 438 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 PARK7Q99497 189 aaKnown RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 NFKBIZQ9BYH8 718 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 MTMR12Q9C0I1 747 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 DDX47Q9H0S4 455 aaKnown RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 AVENQ9NQS1 362 aaPredicted RBP16.01■□□□□ 0.15
CBX3-202ENST00000396386 NUB1Q9Y5A7 615 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 UMODL1Q5DID0 1318 aa16.01■□□□□ 0.15
CBX3-202ENST00000396386 GOLGA6L10A0A0M3HER8 536 aa16■□□□□ 0.15
CBX3-202ENST00000396386 ESYT3A0FGR9 886 aa16■□□□□ 0.15
CBX3-202ENST00000396386 CALCAP01258 141 aa16■□□□□ 0.15
CBX3-202ENST00000396386 GJB1P08034 283 aa16■□□□□ 0.15
CBX3-202ENST00000396386 UNGP13051 313 aaPredicted RBP16■□□□□ 0.15
CBX3-202ENST00000396386 GNA15P30679 374 aa16■□□□□ 0.15
CBX3-202ENST00000396386 IGBP1P78318 339 aa16■□□□□ 0.15
CBX3-202ENST00000396386 DMTNQ08495 405 aa16■□□□□ 0.15
CBX3-202ENST00000396386 PPP2R5EQ16537 467 aa16■□□□□ 0.15
CBX3-202ENST00000396386 MAMDC4Q6UXC1 1216 aa16■□□□□ 0.15
CBX3-202ENST00000396386 KATNBL1Q9H079 304 aa16■□□□□ 0.15
CBX3-202ENST00000396386 RNPEPQ9H4A4 650 aa16■□□□□ 0.15
CBX3-202ENST00000396386 PLEKHA4Q9H4M7 779 aa16■□□□□ 0.15
CBX3-202ENST00000396386 CHORDC1Q9UHD1 332 aaPredicted RBP16■□□□□ 0.15
CBX3-202ENST00000396386 CNTN6Q9UQ52 1028 aa16■□□□□ 0.15
CBX3-202ENST00000396386 MAGEB2O15479 319 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 SART1O43290 800 aaKnown RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 SPOPO43791 374 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 ASS1P00966 412 aaKnown RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 ITGA4P13612 1032 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 INSRRP14616 1297 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 NSFP46459 744 aaKnown RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 CARSP49589 748 aaKnown RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 CENPCQ03188 943 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 SEL1L2Q5TEA6 688 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 TMEM270Q6UE05 265 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 GPR142Q7Z601 462 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 MCOLN2Q8IZK6 566 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 EIF1ADQ8N9N8 165 aaKnown RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 CCDC26Q8TAB7 109 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 AFG1LQ8WV93 481 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 IFT81Q8WYA0 676 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.99■□□□□ 0.157e-9■■■■■ 72.6
CBX3-202ENST00000396386 FAM212AQ96EL1 285 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 PTPRHQ9HD43 1115 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 PRMT7Q9NVM4 692 aaPredicted RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 NFU1Q9UMS0 254 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 CCDC66A2RUB6 948 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 GOLGA6BA6NDN3 693 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 CYP1A1P04798 512 aaPredicted RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 TMEM191BP0C7N4 346 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 ZNF286BP0CG31 522 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 HSPA6P17066 643 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 CTNNA2P26232 953 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 ADCYAP1R1P41586 468 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 MARCKSL1P49006 195 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 ZNF211Q13398 564 aaPredicted RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 CUL1Q13616 776 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 GRB14Q14449 540 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 DUOXA2Q1HG44 320 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 NAA35Q5VZE5 725 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 UBR7Q8N806 425 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 WHAMMQ8TF30 809 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 KRT35Q92764 455 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 CD101Q93033 1021 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 ZBTB10Q96DT7 871 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 ZNF668Q96K58 619 aaPredicted RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 NIF3L1Q9GZT8 377 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 CDT1Q9H211 546 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 ZCCHC17Q9NP64 241 aaKnown RBP15.99■□□□□ 0.15
CBX3-202ENST00000396386 TNFSF13BQ9Y275 285 aa15.99■□□□□ 0.15
CBX3-202ENST00000396386 B4GALT5O43286 388 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 TNNC2P02585 160 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 CTNNA1P35221 906 aaKnown RBP15.98■□□□□ 0.15
CBX3-202ENST00000396386 SPRYD7Q5W111 196 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 EEF1DP3Q658K8 133 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 MAATS1Q7Z4T9 603 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 DPP9Q86TI2 863 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 LINC01465Q8N7H1 131 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 C2orf69Q8N8R5 385 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 BTBD6Q96KE9 485 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 VPS18Q9P253 973 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 FAN1Q9Y2M0 1017 aa15.98■□□□□ 0.15
CBX3-202ENST00000396386 BHMG1C9JSJ3 638 aaPredicted RBP15.97■□□□□ 0.15
CBX3-202ENST00000396386 THAP12O43422 761 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 IL18RAPO95256 599 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 SNAI1O95863 264 aaPredicted RBP15.97■□□□□ 0.15
CBX3-202ENST00000396386 HOXC6P09630 235 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 ZNF132P52740 706 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 MYL6P60660 151 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 NOMO3P69849 1222 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 TFAMQ00059 246 aaKnown RBP15.97■□□□□ 0.15
CBX3-202ENST00000396386 TRPC3Q13507 836 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms