RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 STRN3Q13033 797 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 VARS2Q5ST30 1063 aaKnown RBP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 PDXDC1Q6P996 788 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 GRASPQ7Z6J2 395 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 SLC44A3Q8N4M1 653 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 CALML4Q96GE6 196 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 INTS4Q96HW7 963 aaKnown RBP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 RPP25Q9BUL9 199 aaKnown RBP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 IKZF4Q9H2S9 585 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 IGSF9Q9P2J2 1179 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 KCNG1Q9UIX4 513 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 SRPRBQ9Y5M8 271 aaKnown RBP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 MORC2Q9Y6X9 1032 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 A0A087X0B3 334 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 WDR27A2RRH5 827 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 TISP43B9A030 160 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 NRG2O14511 850 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 CCL16O15467 120 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 CLDN3O15551 220 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 NMT1P30419 496 aaKnown RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 GBP2P32456 591 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 RPL9P32969 192 aaKnown RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 DDIT3P35638 169 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 GTF2BQ00403 316 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 ROR1Q01973 937 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 SPAG1Q07617 926 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 HTR4Q13639 388 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 ENOX2Q16206 610 aaKnown RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 ELMSAN1Q6PJG2 1045 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 ANKS3Q6ZW76 656 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 ALYREFQ86V81 257 aaKnown RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 SLC7A14Q8TBB6 771 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 LARP4BQ92615 738 aaKnown RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 SUSD3Q96L08 255 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 STRA6Q9BX79 667 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 PARVGQ9HBI0 331 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 HCFC1R1Q9NWW0 138 aa17.66■□□□□ 0.42
CXCL12-206ENST00000395795 DNMT3BQ9UBC3 853 aaKnown RBP17.66■□□□□ 0.42
CXCL12-206ENST00000395795 A0A0B4J269 797 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 ANKRD63C9JTQ0 380 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 SYN3O14994 580 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 TRAK2O60296 914 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 PPP1R37O75864 691 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 CLTAP09496 248 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 PDCP20941 246 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 LRPAP1P30533 357 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 AARSP49588 968 aaKnown RBP eCLIP17.65■□□□□ 0.42
CXCL12-206ENST00000395795 GUCY2FP51841 1108 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 UVSSAQ2YD98 709 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 GET4Q7L5D6 327 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-206ENST00000395795 MAP4K3Q8IVH8 894 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 MYCT1Q8N699 235 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 ITFG1Q8TB96 612 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 STAMQ92783 540 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 DNAJC19Q96DA6 116 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 USP28Q96RU2 1077 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 ST6GALNAC4Q9H4F1 302 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 PLEKHA5Q9HAU0 1116 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 PIDD1Q9HB75 910 aa17.65■□□□□ 0.42
CXCL12-206ENST00000395795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.42
CXCL12-206ENST00000395795 ARHGEF37A1IGU5 675 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 KRBA1A5PL33 1030 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 LACTBL1A8MY62 500 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 K7ENM7 598 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 PPEF2O14830 753 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 TRAPPC3O43617 180 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 PI15O43692 258 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 FAM13AO94988 1023 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 SEC24AO95486 1093 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 VNN2O95498 520 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 FSHRP23945 695 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 ZC2HC1CQ53FD0 456 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-206ENST00000395795 PPM1LQ5SGD2 360 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 FBXL5Q9UKA1 691 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 CPSF3Q9UKF6 684 aaKnown RBP17.64■□□□□ 0.41
CXCL12-206ENST00000395795 STYXL1Q9Y6J8 313 aa17.64■□□□□ 0.41
CXCL12-206ENST00000395795 MYMKA6NI61 221 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 H0YCG3 227 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 M0QZQ0 153 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 OGTO15294 1046 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 MRE11P49959 708 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 PTPN5P54829 565 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 SLC39A14Q15043 492 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 SLC5A9Q2M3M2 681 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 LIN9Q5TKA1 542 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 ASTLQ6HA08 431 aaPredicted RBP17.63■□□□□ 0.41
CXCL12-206ENST00000395795 ZNF461Q8TAF7 563 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 DDX12PQ92771 950 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 FGF13Q92913 245 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 FGF14Q92915 247 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 CDH7Q9ULB5 785 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 NUMBLQ9Y6R0 609 aa17.63■□□□□ 0.41
CXCL12-206ENST00000395795 K7ELQ4 463 aaPredicted RBP17.62■□□□□ 0.41
CXCL12-206ENST00000395795 HNRNPDLO14979 420 aaKnown RBP17.62■□□□□ 0.41
CXCL12-206ENST00000395795 CYP3A5P20815 502 aa17.62■□□□□ 0.41
CXCL12-206ENST00000395795 ADSSP30520 456 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms