RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 JPH2Q9BR39 696 aaPredicted RBP7.5□□□□□ -1.21
RTN4-205ENST00000394609 MSTO1Q9BUK6 570 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 INO80BQ9C086 356 aaPredicted RBP7.5□□□□□ -1.21
RTN4-205ENST00000394609 TMEM117Q9H0C3 514 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 DEF6Q9H4E7 631 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 MINDY3Q9H8M7 445 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 TRIM10Q9UDY6 481 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.5□□□□□ -1.21
RTN4-205ENST00000394609 RSPH14Q9UHP6 348 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 ADAM21Q9UKJ8 722 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 AGO2Q9UKV8 859 aaKnown RBP7.5□□□□□ -1.21
RTN4-205ENST00000394609 AKT3Q9Y243 479 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 MRFAP1Q9Y605 127 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 TRPM7Q96QT4 1865 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 MYH9P35579 1960 aaKnown RBP7.5□□□□□ -1.21
RTN4-205ENST00000394609 MYH11P35749 1972 aa7.5□□□□□ -1.21
RTN4-205ENST00000394609 LOXHD1Q8IVV2 1947 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 A0A0B4J269 797 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 ZNF263O14978 683 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 MAPK13O15264 365 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 FANCGO15287 622 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 MAGEB2O15479 319 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CLDN3O15551 220 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 B4GALT5O43286 388 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 EXTL3O43909 919 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 AKR1B10O60218 316 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 ERLIN1O75477 346 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 PRKCBP05771 671 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 IQCF3P0C7M6 154 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 HOXD8P13378 290 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 FSHRP23945 695 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CYLC1P35663 651 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 FLT3LGP49771 235 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 MXI1P50539 228 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CDK17Q00537 523 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 GFPT1Q06210 699 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 KIAA0753Q2KHM9 967 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 SLC9C1Q4G0N8 1177 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CDCA2Q69YH5 1023 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 SLFN12LQ6IEE8 588 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 PHLDB3Q6NSJ2 640 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 MTHFD1LQ6UB35 978 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CRELD2Q6UXH1 353 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 SUGP1Q8IWZ8 645 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 CCDC170Q8IYT3 715 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 TRPV1Q8NER1 839 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 LMO3Q8TAP4 145 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 GOLGA1Q92805 767 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 MFSD14AQ96MC6 490 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 WDR24Q96S15 920 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 MRPL4Q9BYD3 311 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 CCDC113Q9H0I3 377 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 AP5M1Q9H0R1 490 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 NUCKS1Q9H1E3 243 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 PDE11AQ9HCR9 933 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 AIPL1Q9NZN9 384 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 LIMD1Q9UGP4 676 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 DNAJC12Q9UKB3 198 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 RAB21Q9UL25 225 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 GINS2Q9Y248 185 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 RRP15Q9Y3B9 282 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 STYXL1Q9Y6J8 313 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 DOCK3Q8IZD9 2030 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 A0A087WZ62 844 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 EIF3CLB5ME19 914 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 IPO7O95373 1038 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 PIGRP01833 764 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 IGHA2P01877 340 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 SERPING1P05155 500 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 MYL3P08590 195 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 SCP2P22307 547 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 TMOD1P28289 359 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 ARHGAP25P42331 645 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 KIF11P52732 1056 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 PTENP60484 403 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 PRKCZQ05513 592 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 KLHL30Q0D2K2 578 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 TMEM62Q0P6H9 643 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CETN1Q12798 172 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 TFDP1Q14186 410 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 DRAP1Q14919 205 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 SPA17Q15506 151 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 ASIC2Q16515 512 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 ARHGAP44Q17R89 818 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 ZPBP2Q6X784 338 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 SV2AQ7L0J3 742 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 HDXQ7Z353 690 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 IRF2BP2Q7Z5L9 587 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 KIAA1328Q86T90 577 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 ARHGEF19Q8IW93 802 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CCDC116Q8IYX3 515 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 TAS1R2Q8TE23 839 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 TRIB2Q92519 343 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 SYN2Q92777 582 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 KAT2BQ92831 832 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 SEMA4DQ92854 862 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 KCNN1Q92952 543 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 SCLT1Q96NL6 688 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 EIF3CQ99613 913 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 ACO2Q99798 780 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms