RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 AAASQ9NRG9 546 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 BMP2KQ9NSY1 1161 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-202ENST00000394180 HDAC9Q9UKV0 1011 aa23.13■■□□□ 1.29
CLDND1-202ENST00000394180 ROBO3Q96MS0 1386 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 CDK5RAP2Q96SN8 1893 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 DNAJC6O75061 913 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 KRT36O76013 467 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 CBX6O95503 412 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 GAS8O95995 478 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 ABHD2P08910 425 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 STAT1P42224 750 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 SESN3P58005 492 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 MAP3K10Q02779 954 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 GRM2Q14416 872 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 GRM4Q14833 912 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 KRT72Q14CN4 511 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 SEL1L2Q5TEA6 688 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 DYMQ7RTS9 669 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 PTCD3Q96EY7 689 aaKnown RBP23.12■■□□□ 1.29
CLDND1-202ENST00000394180 LRRC19Q9H756 370 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 PLCG2P16885 1265 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 MAN1A1P33908 653 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 PHEXP78562 749 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 XIAPP98170 497 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 FYB2Q5VWT5 728 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 TTC27Q6P3X3 843 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 PHLDB2Q86SQ0 1253 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 SPATA24Q86W54 205 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 DGKHQ86XP1 1220 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 TDRPQ86YL5 185 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 TIMMDC1Q9NPL8 285 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 TBCCD1Q9NVR7 557 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 SERPINA10Q9UK55 444 aa23.12■■□□□ 1.29
CLDND1-202ENST00000394180 ANKRD62A6NC57 917 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 CCNT1O60563 726 aaKnown RBP23.11■■□□□ 1.29
CLDND1-202ENST00000394180 ECEL1O95672 775 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 HPCAP84074 193 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 NLRP9Q7RTR0 991 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 TTC25Q96NG3 672 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 FOXP3Q9BZS1 431 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 PPCSQ9HAB8 311 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 DDX4Q9NQI0 724 aaKnown RBP23.11■■□□□ 1.29
CLDND1-202ENST00000394180 HSFX1Q9UBD0 423 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 NAALADL1Q9UQQ1 740 aa23.11■■□□□ 1.29
CLDND1-202ENST00000394180 MAGEC1O60732 1142 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 GNA11P29992 359 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 NFIAQ12857 509 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 ZC2HC1CQ53FD0 456 aaPredicted RBP23.1■■□□□ 1.29
CLDND1-202ENST00000394180 RFWD3Q6PCD5 774 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 FAM47EQ6ZV65 393 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 CCDC65Q8IXS2 484 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 ALG3Q92685 438 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.29
CLDND1-202ENST00000394180 NSL1Q96IY1 281 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 PRMT6Q96LA8 375 aaPredicted RBP23.1■■□□□ 1.29
CLDND1-202ENST00000394180 ECSITQ9BQ95 431 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 SYT11Q9BT88 431 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 MYO3BQ8WXR4 1341 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 FZD9O00144 591 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 BIRC5O15392 142 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 AP1G1O43747 822 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 EPHA7Q15375 998 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 PTPROQ16827 1216 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 ZNF554Q86TJ5 538 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 OLIG1Q8TAK6 271 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 DGCR14Q96DF8 476 aaKnown RBP23.1■■□□□ 1.29
CLDND1-202ENST00000394180 TUBGCP5Q96RT8 1024 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 ZSWIM1Q9BR11 485 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 MRIQ9BWK5 157 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 WNT8AQ9H1J5 351 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 MLXIPLQ9NP71 852 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 OSGEPQ9NPF4 335 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 PAIP2BQ9ULR5 123 aaKnown RBP23.1■■□□□ 1.29
CLDND1-202ENST00000394180 PCDHA2Q9Y5H9 948 aa23.1■■□□□ 1.29
CLDND1-202ENST00000394180 SLC9A1P19634 815 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 LRRC41Q15345 812 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 ADRM1Q16186 407 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 CCDC105Q8IYK2 499 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 LNX1Q8TBB1 728 aaPredicted RBP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 MAML1Q92585 1016 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 POLR3CQ9BUI4 534 aaPredicted RBP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 GPAMQ9HCL2 828 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 SSU72Q9NP77 194 aaKnown RBP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 SIX2Q9NPC8 291 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 DDX25Q9UHL0 483 aaKnown RBP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 TRAF3IP3Q9Y228 551 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 GJA3Q9Y6H8 435 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 GYG2O15488 501 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 ACSL3O95573 720 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 UBTFL6P0CB48 400 aaPredicted RBP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 TROVE2P10155 538 aaKnown RBP eCLIP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 RASA2Q15283 850 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 KYNUQ16719 465 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 KRT79Q5XKE5 535 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 MCUR1Q96AQ8 359 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 TDRD3Q9H7E2 651 aaKnown RBP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 ARPP21Q9UBL0 812 aaPredicted RBP23.09■■□□□ 1.29
CLDND1-202ENST00000394180 SH3GLB1Q9Y371 365 aa23.09■■□□□ 1.29
CLDND1-202ENST00000394180 LAMB1P07942 1786 aa23.08■■□□□ 1.29
CLDND1-202ENST00000394180 ZNF541Q9H0D2 1346 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms