RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 DAB1O75553 588 aa20.75■□□□□ 0.91
SHANK1-203ENST00000391813 SYNJ2BP-COX16A0A087WUM0 186 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 C19orf81C9J6K1 198 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 F5H6K3 240 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 ADCY3O60266 1144 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 UBOX5O94941 541 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 TRPC1P48995 793 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 KLRC3Q07444 240 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 SRBD1Q8N5C6 995 aaKnown RBP20.74■□□□□ 0.91
SHANK1-203ENST00000391813 RXFP1Q9HBX9 757 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 COX16Q9P0S2 106 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 ALG6Q9Y672 507 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 STXBP2Q15833 593 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 MIEF2Q96C03 454 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 ALG13Q9NP73 1137 aaKnown RBP20.74■□□□□ 0.91
SHANK1-203ENST00000391813 CLDN3O15551 220 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 PRELPP51888 382 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 DNAJC3Q13217 504 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 P3H1Q32P28 736 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 FOXR1Q6PIV2 292 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 MFN1Q8IWA4 741 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 RCOR2Q8IZ40 523 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 K7ERI5 159 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 PIK3R2O00459 728 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 STRNO43815 780 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 TARSP26639 723 aaKnown RBP20.74■□□□□ 0.91
SHANK1-203ENST00000391813 ROR1Q01973 937 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 TBX2Q13207 712 aaPredicted RBP20.74■□□□□ 0.91
SHANK1-203ENST00000391813 TMEM270Q6UE05 265 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 MCPH1Q8NEM0 835 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 NSUN6Q8TEA1 469 aaKnown RBP20.74■□□□□ 0.91
SHANK1-203ENST00000391813 GTF3C2Q8WUA4 911 aaPredicted RBP20.74■□□□□ 0.91
SHANK1-203ENST00000391813 NACA2Q9H009 215 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 PARVAQ9NVD7 372 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 TSC22D4Q9Y3Q8 395 aa20.74■□□□□ 0.91
SHANK1-203ENST00000391813 POTEFA5A3E0 1075 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 POTEIP0CG38 1075 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 PAMP19021 973 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 PAX7P23759 505 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 POTEGQ6S5H5 508 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 POTEEQ6S8J3 1075 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 PADI6Q6TGC4 694 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 C16orf89Q6UX73 402 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 ABI1Q8IZP0 508 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 KIRREL3Q8IZU9 778 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 AENQ8WTP8 325 aaKnown RBP20.73■□□□□ 0.91
SHANK1-203ENST00000391813 ZBTB18Q99592 522 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 CCT7Q99832 543 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 ZNF229Q9UJW7 825 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 LRCH1Q9Y2L9 728 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 EMSYQ7Z589 1322 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 C16orf96A6NNT2 1141 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 SUPT3HO75486 399 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 TRIM49P0CI25 452 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 TRIM49CP0CI26 452 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 SERPINB9P50453 376 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 C12orf60Q5U649 245 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 LVRNQ6Q4G3 990 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 TPCN2Q8NHX9 752 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 LPAR1Q92633 364 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 CEP95Q96GE4 821 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 RPS6KC1Q96S38 1066 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 ASCC2Q9H1I8 757 aaPredicted RBP20.73■□□□□ 0.91
SHANK1-203ENST00000391813 SNX25Q9H3E2 840 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 GTSE1Q9NYZ3 720 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 TFR2Q9UP52 801 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 HPS5Q9UPZ3 1129 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 EIF2AK2P19525 551 aaKnown RBP20.73■□□□□ 0.91
SHANK1-203ENST00000391813 CENPCQ03188 943 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 SETD3Q86TU7 594 aaPredicted RBP20.73■□□□□ 0.91
SHANK1-203ENST00000391813 CCDC90BQ9GZT6 254 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 SEPT3Q9UH03 358 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 PI4K2BG5E9Z4 385 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 H0Y626 953 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 H3BRJ5 948 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 TRIM16O95361 564 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
SHANK1-203ENST00000391813 HERVK_113P62684 666 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 SBK1Q52WX2 424 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 WASHC2DQ5SRD0 308 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 ZKSCAN4Q969J2 545 aaPredicted RBP20.73■□□□□ 0.91
SHANK1-203ENST00000391813 MSTO1Q9BUK6 570 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 MANSC1Q9H8J5 431 aa20.73■□□□□ 0.91
SHANK1-203ENST00000391813 PDE5AO76074 875 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 SNRNP48Q6IEG0 339 aaKnown RBP20.72■□□□□ 0.91
SHANK1-203ENST00000391813 NLRP9Q7RTR0 991 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 FAM167AQ96KS9 214 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 GPBP1L1Q9HC44 474 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-203ENST00000391813 RNF146Q9NTX7 359 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 AIPL1Q9NZN9 384 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 PHTF1Q9UMS5 762 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 TMCC1O94876 653 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 TDP2O95551 362 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 COILP38432 576 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-203ENST00000391813 MRPS15P82914 257 aaKnown RBP20.72■□□□□ 0.91
SHANK1-203ENST00000391813 INPP5AQ14642 412 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 ZNF70Q9UC06 446 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-203ENST00000391813 LZTS1Q9Y250 596 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 GOLGA8RI6L899 631 aa20.72■□□□□ 0.91
SHANK1-203ENST00000391813 CRELD2Q6UXH1 353 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms