RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 CMTR2Q8IYT2 770 aaKnown RBP4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 CPA6Q8N4T0 437 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 FITM2Q8N6M3 262 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 DCBLD1Q8N8Z6 715 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 NUP133Q8WUM0 1156 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 MLST8Q9BVC4 326 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 RNPEPQ9H4A4 650 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 GSTO2Q9H4Y5 243 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 PCDHB1Q9Y5F3 818 aa4.81□□□□□ -1.64
SNORA40.3-201ENST00000390964 WDR33Q9C0J8 1336 aaKnown RBP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 A0A1B0GTW7 788 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 TCRBV7S2A1N4TA0A589 114 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 KIAA0391O15091 583 aaKnown RBP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 ELANEP08246 267 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 MTHFD1P11586 935 aaKnown RBP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 VCAM1P19320 739 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 SLC6A2P23975 617 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 DDX6P26196 483 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 TAP1Q03518 808 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 PABPC1LQ4VXU2 614 aaKnown RBP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 TMEM132CQ8N3T6 1108 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 CPEB3Q8NE35 698 aaKnown RBP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 IL17RDQ8NFM7 739 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 NSUN6Q8TEA1 469 aaKnown RBP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 CLPTM1LQ96KA5 538 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 DMRTA2Q96SC8 542 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 MAN1C1Q9NR34 630 aa4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 DDX56Q9NY93 547 aaKnown RBP4.8□□□□□ -1.64
SNORA40.3-201ENST00000390964 FOXN1O15353 648 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 LPXNO60711 386 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 HAUS5O94927 633 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 PRSS23O95084 383 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 PDGFRBP09619 1106 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 KRT4P19013 534 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 PDCP20941 246 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 GUCY1B3Q02153 619 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 DSC2Q02487 901 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 TLE1Q04724 770 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 SPDYE7PQ495Y7 208 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 LAIR1Q6GTX8 287 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 GADL1Q6ZQY3 521 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 FAM43AQ8N2R8 423 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 PRR18Q8N4B5 295 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 STAG1Q8WVM7 1258 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 KAT5Q92993 513 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 RAB24Q969Q5 203 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 FUBP1Q96AE4 644 aaKnown RBP4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 BOD1Q96IK1 185 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 PNKPQ96T60 521 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 ADAM2Q99965 735 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 SERHL2Q9H4I8 314 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 TMEM74BQ9NUR3 256 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 LUC7L2Q9Y383 392 aaKnown RBP4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 COL4A3Q01955 1670 aa4.79□□□□□ -1.64
SNORA40.3-201ENST00000390964 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 GRM6O15303 877 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 B3GALT2O43825 422 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 DTNBO60941 627 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 ALDH1L1O75891 902 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 CDKL5O76039 1030 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 FGFR4P22455 802 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 AKAP5P24588 427 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 FXR1P51114 621 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 ZNF280AP59817 542 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 OCA2Q04671 838 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 RESTQ13127 1097 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 THEMIS2Q5TEJ8 643 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 B3GNTL1Q67FW5 361 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 CHFRQ96EP1 664 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 HSPBAP1Q96EW2 488 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 MED15Q96RN5 788 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 CEP89Q96ST8 783 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 NUP88Q99567 741 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 JKAMPQ9P055 326 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 POLHQ9Y253 713 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 MAP3K2Q9Y2U5 619 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 NOX1Q9Y5S8 564 aa4.78□□□□□ -1.64
SNORA40.3-201ENST00000390964 A0A087X1B8 175 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 E2F8A0AVK6 867 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 PIPSLA2A3N6 862 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 SLC16A6O15403 523 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 RAMP2O60895 175 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 SLC43A1O75387 559 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 ARIH2O95376 493 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 GPANK1O95872 356 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 FOSP01100 380 aaPredicted RBP4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 POU2F2P09086 479 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 SBK3P0C264 359 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 SLC6A4P31645 630 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 ZEB1P37275 1124 aaPredicted RBP4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 NOMO3P69849 1222 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 BLOC1S1P78537 153 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 NOMO2Q5JPE7 1267 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 ABHD17BQ5VST6 288 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 FOXR2Q6PJQ5 311 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 USP45Q70EL2 814 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 TBC1D15Q8TC07 691 aa4.77□□□□□ -1.65
SNORA40.3-201ENST00000390964 HOOK2Q96ED9 719 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms