RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 EIF2AQ9BY44 585 aaKnown RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 FUT8Q9BYC5 575 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 ARFGAP3Q9NP61 516 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 MORF4L1Q9UBU8 362 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 ACKR2O00590 384 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 PPEF2O14830 753 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 STAG3L1P0CL83 205 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 ACO1P21399 889 aaKnown RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 CUL2Q13617 745 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 JADE1Q6IE81 842 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 KCNV1Q6PIU1 500 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 TLK2Q86UE8 772 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 SLC17A8Q8NDX2 589 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 KAT2BQ92831 832 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
LTN1-203ENST00000389195 LUC7LQ9NQ29 371 aaKnown RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 CPSF3Q9UKF6 684 aaKnown RBP10.89□□□□□ -0.67
LTN1-203ENST00000389195 THAP12O43422 761 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 FGGP02679 453 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 ITGB3P05106 788 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 FAM153BP0C7A2 387 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 ZBTB48P10074 688 aaPredicted RBP10.88□□□□□ -0.67
LTN1-203ENST00000389195 TCF4P15884 667 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 COMTP21964 271 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 PSMC4P43686 418 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 FAM153CQ494X1 144 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 CDCA2Q69YH5 1023 aaPredicted RBP10.88□□□□□ -0.67
LTN1-203ENST00000389195 IFNL1Q8IU54 200 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 TFAP2BQ92481 460 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 HVCN1Q96D96 273 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 FZD8Q9H461 694 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 TMEM134Q9H6X4 195 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 PTPRHQ9HD43 1115 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 AMACRQ9UHK6 382 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 FAM153AQ9UHL3 310 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 ANKRD62A6NC57 917 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 TNPO2O14787 897 aaKnown RBP10.88□□□□□ -0.67
LTN1-203ENST00000389195 OGTO15294 1046 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 GTF2H1P32780 548 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 CARSP49589 748 aaKnown RBP10.88□□□□□ -0.67
LTN1-203ENST00000389195 CDR2Q01850 454 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 GUCY2DQ02846 1103 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 CYP4A22Q5TCH4 519 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 SLFN12LQ6IEE8 588 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 RGMBQ6NW40 437 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 MPZL3Q6UWV2 235 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 ZDHHC14Q8IZN3 488 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 RFFLQ8WZ73 363 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 PDZD7Q9H5P4 517 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 VTA1Q9NP79 307 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 GJD2Q9UKL4 321 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 USTQ9Y2C2 406 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 C5orf42Q9H799 3197 aa10.88□□□□□ -0.67
LTN1-203ENST00000389195 MEIS3P2A8K0S8 358 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 H3BQF6 201 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 MAPK13O15264 365 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 P4HA2O15460 535 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 C6orf222P0C671 652 aaPredicted RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 TMEM191BP0C7N4 346 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 TMEM253P0C7T8 217 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 TCP1P17987 556 aaKnown RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 TMOD1P28289 359 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 GNA15P30679 374 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 DGKDQ16760 1214 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 SLC10A6Q3KNW5 377 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 ATP13A4Q4VNC1 1196 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 CHADLQ6NUI6 762 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 MMS22LQ6ZRQ5 1243 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 SESTD1Q86VW0 696 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 RBBP8NLQ8NC74 664 aaPredicted RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 TRPV1Q8NER1 839 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 TCP11Q8WWU5 503 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 TAF4BQ92750 862 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 TWNKQ96RR1 684 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 CGRRF1Q99675 332 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 SMYD3Q9H7B4 428 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 GOLGA2P5Q9HBQ8 144 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 EPB41L5Q9HCM4 733 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 ARGLU1Q9NWB6 273 aaPredicted RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 CNOT8Q9UFF9 292 aaKnown RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 SIX4Q9UIU6 781 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 RAD51CO43502 376 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 CTSHP09668 335 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 ZNF865P0CJ78 1059 aaPredicted RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 SMIM10L2AP0DMW4 78 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 SMIM10L2BP0DMW5 78 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 ELNP15502 786 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 SSR1P43307 286 aaKnown RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 EFNA5P52803 228 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 RPL7AP62424 266 aaKnown RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 GPC5P78333 572 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 CLDN10P78369 228 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 MCL1Q07820 350 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms